C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor protein, translationally-controlled, pseudogene 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121768 Tpt1-ps6-001 ENSMUSG00000084284 10090 + X:101768535-101769057 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000121768
Transcript ID Adipose Bladder Brain Breast Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121768 0.142±0.04 0.110±0.04 0.065±0.02 0.253±0.00 0.089±0.00 0.024±0.01 0.259±0.03 0.147±0.07 0.500±0.37 0.391±0.29 0.089±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065Y CIL_00065Y_0002 CGP X:101731535-101798642

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309246 TPT1-004 protein_coding Homo_sapiens 0 636
ENST00000379055 TPT1-003 protein_coding Homo_sapiens 0 603
ENST00000379060 TPT1-011 protein_coding Homo_sapiens 0 628
ENST00000442760 TPT1-007 retained_intron Homo_sapiens 2e-34 150
ENST00000527226 TPT1-012 protein_coding Homo_sapiens 0 564
ENST00000530705 TPT1-001 protein_coding Homo_sapiens 0 641
ENST00000616577 TPT1-201 protein_coding Homo_sapiens 0 636

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