C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor protein, translationally-controlled 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379060 TPT1-011 ENSG00000133112 9606 - 13:45337198-45341122 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000379060
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000379060 1619.530±0.00 2256.800±0.00 85.094±0.00 273.743±177.12 875.247±533.69 1360.342±1086.15 450.716±357.16 757.751±305.83 703.902±422.85 1433.444±1100.65 1997.033±1500.94 2158.967±939.01 2076.830±674.45 861.781±611.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110894 Tpt1-001 protein_coding Mus_musculus 0 821
ENSMUST00000134040 Tpt1-005 processed_transcript Mus_musculus 0 678
ENSMUST00000142061 Tpt1-002 protein_coding Mus_musculus 0 675
ENSMUST00000121046 Tpt1-ps3-001 processed_pseudogene Mus_musculus 0 669
ENSMUST00000121768 Tpt1-ps6-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000112150 Tpt1-ps5-201 processed_pseudogene Mus_musculus 0 614
ENSMUST00000154533 Tpt1-006 retained_intron Mus_musculus 0 512
ENSMUST00000150047 Tpt1-003 retained_intron Mus_musculus 0 377
ENSMUST00000128889 Tpt1-004 retained_intron Mus_musculus 2e-33 147

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