C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor protein, translationally-controlled 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000309246 TPT1-004 ENSG00000133112 9606 - 13:45338185-45341086 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENST00000309246
Transcript ID Placenta
ENST00000309246 544.271±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IDA calcium ion binding
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005771 IDA multivesicular body
GO:0006816 IC calcium ion transport
GO:0006874 IC cellular calcium ion homeostasis
GO:0009615 IEP response to virus
GO:0042981 NAS regulation of apoptotic process
GO:0043066 TAS negative regulation of apoptotic process
GO:0044822 IDA poly(A) RNA binding
GO:0045298 IDA tubulin complex
GO:0070062 IDA extracellular vesicular exosome
GO:1902230 IMP negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110894 Tpt1-001 protein_coding Mus_musculus 0 680
ENSMUST00000121046 Tpt1-ps3-001 processed_pseudogene Mus_musculus 0 676
ENSMUST00000121768 Tpt1-ps6-001 processed_pseudogene Mus_musculus 0 636
ENSMUST00000112150 Tpt1-ps5-201 processed_pseudogene Mus_musculus 0 627
ENSMUST00000154533 Tpt1-006 retained_intron Mus_musculus 0 525
ENSMUST00000134040 Tpt1-005 processed_transcript Mus_musculus 0 525
ENSMUST00000142061 Tpt1-002 protein_coding Mus_musculus 0 521
ENSMUST00000150047 Tpt1-003 retained_intron Mus_musculus 0 390
ENSMUST00000128889 Tpt1-004 retained_intron Mus_musculus 4e-37 159
ENSMUST00000145380 Ckmt1-003 retained_intron Mus_musculus 0.0000004 60

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