C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 14237
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122080 Gm14237-001 ENSMUSG00000083342 10090 - 2:168242001-168242430 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENSMUST00000122080
Transcript ID Bladder
ENSMUST00000122080 0.088±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VZ CIL_0007VZ_0002 VISTA 2:167749064-168350864
CIL_0004Q2 CIL_0004Q2_0002 CGP 2:168230622-168281736

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295491 MRPS18C-001 protein_coding Homo_sapiens 0 291
ENST00000321945 FAM175A-001 protein_coding Homo_sapiens 1e-23 117
ENST00000475656 FAM175A-002 nonsense_mediated_decay Homo_sapiens 6e-24 117
ENST00000505525 MRPS18C-007 retained_intron Homo_sapiens 1e-24 117
ENST00000505719 MRPS18C-005 protein_coding Homo_sapiens 4e-34 148
ENST00000507019 MRPS18C-003 protein_coding Homo_sapiens 0 206
ENST00000507349 MRPS18C-006 protein_coding Homo_sapiens 3e-33 145
ENST00000509970 MRPS18C-010 protein_coding Homo_sapiens 0 206
ENST00000514581 MRPS18C-004 retained_intron Homo_sapiens 0 209
ENST00000603391 RP11-62H7.3-001 processed_pseudogene Homo_sapiens 3e-28 128

Loading