C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: collagen, type XXVIII, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123163 Col28a1-002 ENSMUSG00000068794 10090 - 6:8074822-8079748 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000123163
Transcript ID Ovary
ENSMUST00000123163 0.325±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002V5 CIL_0002V5_0002 CGP 6:7997808-8236274

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000399429 COL28A1-001 protein_coding Homo_sapiens 0 241
ENST00000435823 COL28A1-004 protein_coding Homo_sapiens 0 239
ENST00000444268 COL28A1-002 nonsense_mediated_decay Homo_sapiens 0 241

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