C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002V5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000215018-ENSG00000164654 CGP 9606 7:7356203-7608929
GeneTranscriptPositionBiotype
ENSG00000164654 (MIOS)
missing oocyte, meiosis regulator, homolog (Drosophila) 		ENST00000340080 (MIOS-001) 7566872-7607496 protein_coding
ENST00000405785 (MIOS-002) 7566875-7607223 protein_coding
ENST00000433056 (MIOS-008) 7567053-7572667 protein_coding
ENST00000433635 (MIOS-006) 7566961-7572925 protein_coding
ENST00000445169 (MIOS-009) 7567483-7572667 protein_coding
ENST00000456533 (MIOS-005) 7566988-7573013 protein_coding
ENST00000461907 (MIOS-007) 7581729-7583372 processed_transcript
ENST00000479694 (MIOS-004) 7605118-7608929 retained_intron
ENST00000493227 (MIOS-003) 7582954-7608925 retained_intron
ENSG00000215018 (COL28A1)
collagen, type XXVIII, alpha 1 		ENST00000399429 (COL28A1-001) 7357875-7535853 protein_coding
ENST00000430711 (COL28A1-005) 7356203-7370841 nonsense_mediated_decay
ENST00000435823 (COL28A1-004) 7431218-7437435 protein_coding
ENST00000444268 (COL28A1-002) 7417632-7520073 nonsense_mediated_decay
ENST00000453441 (COL28A1-006) 7356568-7360459 protein_coding
ENST00000465339 (COL28A1-003) 7417632-7420310 retained_intron
ENSG00000272732 (RP5-1159O4.2)
 ENST00000608770 (RP5-1159O4.2-001) 7550104-7552440 lincRNA
CIL_0002V5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000068794-ENSMUSG00000042447 CGP 10090 6:7997808-8236274
GeneTranscriptPositionBiotype
ENSMUSG00000042447 (Mios)
missing oocyte, meiosis regulator, homolog (Drosophila) 		ENSMUST00000040017 (Mios-001) 8209222-8236274 protein_coding
ENSMUST00000160265 (Mios-002) 8226635-8236268 retained_intron
ENSMUST00000161134 (Mios-003) 8229505-8236268 retained_intron
ENSMUSG00000068794 (Col28a1)
collagen, type XXVIII, alpha 1 		ENSMUST00000115537 (Col28a1-001) 7997808-8192617 protein_coding
ENSMUST00000123163 (Col28a1-002) 8074822-8079748 processed_transcript
ENSMUST00000134731 (Col28a1-003) 8021290-8022766 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002V5_0001ENSG00000164654ENST00000340080ENST00000405785ENST00000433056ENST00000433635ENST00000445169ENST00000456533ENST00000461907ENST00000479694ENST00000493227ENSG00000215018ENST00000399429ENST00000430711ENST00000435823ENST00000444268ENST00000453441ENST00000465339ENSG00000272732ENST00000608770CIL_0002V5_0002ENSMUSG00000042447ENSMUST00000040017ENSMUST00000160265ENSMUST00000161134ENSMUSG00000068794ENSMUST00000115537ENSMUST00000123163ENSMUST00000134731
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002V5_0001ENSG00000164654ENST00000340080ENST00000405785ENST00000493227ENSG00000215018ENST00000399429ENST00000430711ENST00000444268ENST00000453441ENSG00000272732ENST00000608770CIL_0002V5_0002ENSMUSG00000042447ENSMUST00000040017ENSMUST00000161134ENSMUSG00000068794ENSMUST00000115537ENSMUST00000123163
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164654 ENST00000340080 1.048±0.00 1.179±0.00 N/A 1.080±0.70 0.775±0.00 1.377±0.46 2.641±0.00 1.508±0.28 1.641±0.00 1.054±0.00 8.192±7.07 2.535±0.29 1.502±0.29 3.948±0.00
ENST00000405785 2.291±0.00 2.528±0.00 N/A 1.764±0.15 3.472±0.20 1.933±0.77 2.612±0.00 2.361±0.85 0.761±0.00 1.810±0.46 4.250±3.93 4.229±3.23 2.695±2.70 15.557±8.05
ENST00000433056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461907 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493227 N/A 0.703±0.00 0.599±0.00 0.630±0.00 0.871±0.00 N/A N/A 0.800±0.34 0.606±0.00 N/A N/A 1.372±0.28 N/A N/A
ENSG00000215018 ENST00000399429 0.260±0.00 N/A N/A 0.166±0.00 0.181±0.00 2.570±2.44 0.535±0.38 0.309±0.08 0.844±0.00 N/A 0.044±0.00 0.394±0.30 0.074±0.02 0.544±0.06
ENST00000430711 N/A N/A N/A 0.190±0.00 0.304±0.00 0.301±0.00 N/A 0.423±0.00 0.093±0.00 0.823±0.00 0.061±0.00 0.440±0.00 0.095±0.01 0.382±0.00
ENST00000435823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444268 N/A N/A N/A N/A N/A 0.513±0.00 N/A N/A N/A 1.013±0.00 N/A N/A 0.112±0.00 N/A
ENST00000453441 N/A 0.411±0.00 N/A 0.500±0.00 1.004±0.00 N/A N/A N/A N/A N/A N/A N/A 0.255±0.00 N/A
ENST00000465339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000272732 ENST00000608770 0.031±0.00 0.292±0.00 N/A 0.193±0.03 0.129±0.00 0.168±0.13 0.037±0.02 0.707±0.00 0.102±0.08 0.104±0.00 0.554±0.00 0.293±0.18 0.051±0.04 0.209±0.09
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042447 ENSMUST00000040017 2.408±0.56 5.092±1.00 3.697±0.08 4.778±0.72 3.925±1.53 3.441±0.47 2.109±0.18 2.544±0.72 2.788±1.60 3.567±1.11 3.950±0.49 3.877±1.69 5.599±2.36 9.964±9.56
ENSMUST00000160265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161134 N/A N/A N/A N/A 0.421±0.00 N/A N/A N/A N/A 0.446±0.00 N/A 0.854±0.23 N/A N/A
ENSMUSG00000068794 ENSMUST00000115537 0.375±0.16 0.218±0.07 N/A 0.385±0.00 0.959±0.15 0.487±0.10 0.128±0.03 0.098±0.04 0.029±0.02 0.168±0.02 0.343±0.12 0.225±0.22 0.017±0.01 0.348±0.17
ENSMUST00000123163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.325±0.06 N/A N/A
ENSMUST00000134731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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