| Transcript ID | Colon | Lung | Placenta |
|---|---|---|---|
| ENST00000444268 | 0.513±0.00 | 1.013±0.00 | 0.112±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | collagen, type XXVIII, alpha 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000444268  |
COL28A1-002 |
ENSG00000215018 |
9606 | - |
7:7417632-7520073  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0002V5 | CIL_0002V5_0001 | CGP | 7:7356203-7608929 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004867 | IEA | serine-type endopeptidase inhibitor activity |
| GO:0005576 | TAS | extracellular region |
| GO:0005581 | IEA | collagen trimer |
| GO:0005788 | TAS | endoplasmic reticulum lumen |
| GO:0007155 | IEA | cell adhesion |
| GO:0010951 | IEA | negative regulation of endopeptidase activity |
| GO:0030198 | TAS | extracellular matrix organization |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000115537
|
Col28a1-001 | protein_coding | Mus_musculus | 0 | 1478 |
|
ENSMUST00000123163
|
Col28a1-002 | processed_transcript | Mus_musculus | 0 | 241 |
