C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif-containing 28
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123778 Trim28-009 ENSMUSG00000005566 10090 + 7:13030372-13031032 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLiverOvaryPlacentaENSMUST00000123778
Transcript ID Breast Heart Kidney Liver Ovary Placenta
ENSMUST00000123778 48.270±3.60 23.384±0.29 36.726±3.13 27.205±0.00 124.212±0.00 95.800±25.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070O CIL_00070O_0002 CGP 7:13004936-13031035
CIL_0006Z2 CIL_0006Z2_0002 CGP 7:13024152-13034777

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253024 TRIM28-001 protein_coding Homo_sapiens 0 438
ENST00000341753 TRIM28-003 protein_coding Homo_sapiens 0 438
ENST00000597136 TRIM28-002 protein_coding Homo_sapiens 0 438

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