C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatase and actin regulator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123987 Phactr1-012 ENSMUSG00000054728 10090 + 13:43125920-43135249 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000123987
Transcript ID Testis
ENSMUST00000123987 39.885±35.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003IC CIL_0003IC_0002 CGP 13:42301270-43138526
CIL_0001BV CIL_0001BV_0003 CGP 13:42680623-43171501

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332995 PHACTR1-005 protein_coding Homo_sapiens 0 438
ENST00000379329 PHACTR1-004 protein_coding Homo_sapiens 0 257
ENST00000379335 PHACTR1-003 protein_coding Homo_sapiens 0 438
ENST00000415087 PHACTR1-201 protein_coding Homo_sapiens 0 438
ENST00000489548 PHACTR1-009 processed_transcript Homo_sapiens 0 309

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