C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatase and actin regulator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000415087 PHACTR1-201 ENSG00000112137 9606 + 6:13053363-13287840 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartMuscleENST00000415087
Transcript ID Adipose Brain Heart Muscle
ENST00000415087 1.311±0.00 4.367±0.00 5.839±2.54 0.152±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003IC CIL_0003IC_0001 CGP 6:12290363-13290484
CIL_0001BV CIL_0001BV_0002 CGP 6:12716805-13328583

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066928 Phactr1-002 protein_coding Mus_musculus 0 1993
ENSMUST00000128646 Phactr1-001 protein_coding Mus_musculus 0 1993
ENSMUST00000149235 Phactr1-008 protein_coding Mus_musculus 0 1923
ENSMUST00000148891 Phactr1-003 protein_coding Mus_musculus 0 1491
ENSMUST00000131942 Phactr1-005 protein_coding Mus_musculus 0 1476
ENSMUST00000110161 Phactr1-201 protein_coding Mus_musculus 0 1345
ENSMUST00000136576 Phactr1-006 processed_transcript Mus_musculus 0 595
ENSMUST00000137434 Phactr1-010 processed_transcript Mus_musculus 0 593
ENSMUST00000140651 Phactr1-011 processed_transcript Mus_musculus 0 442
ENSMUST00000150620 Phactr1-007 processed_transcript Mus_musculus 0 442
ENSMUST00000123987 Phactr1-012 processed_transcript Mus_musculus 0 438
ENSMUST00000138640 Phactr1-013 processed_transcript Mus_musculus 0 425
ENSMUST00000136951 Phactr1-014 processed_transcript Mus_musculus 2e-38 165

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