C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: latrophilin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124117 Lphn3-018 ENSMUSG00000037605 10090 + 5:81660303-81796634 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000124117
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000124117 1.299±0.00 0.814±0.05 5.956±0.00 0.800±0.00 0.319±0.00 0.085±0.00 0.124±0.04 0.111±0.08 0.036±0.01 1.438±0.26 0.101±0.04 1.583±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001WQ CIL_0001WQ_0002 CGP 5:77349240-81825133
CIL_0001WJ CIL_0001WJ_0002 CGP 5:81020138-83355195

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000131113 LPHN3 (2 of 2)-201 protein_coding Danio_rerio 0 327
ENST00000502815 LPHN3-002 protein_coding Homo_sapiens 0 3746
ENST00000504896 LPHN3-012 protein_coding Homo_sapiens 0 2097
ENST00000506700 LPHN3-015 protein_coding Homo_sapiens 0 2259
ENST00000506720 LPHN3-008 protein_coding Homo_sapiens 0 2097
ENST00000506746 LPHN3-009 protein_coding Homo_sapiens 0 2255
ENST00000507164 LPHN3-004 protein_coding Homo_sapiens 0 2255
ENST00000507625 LPHN3-016 protein_coding Homo_sapiens 0 3332
ENST00000508078 LPHN3-017 processed_transcript Homo_sapiens 0 612
ENST00000508693 LPHN3-011 protein_coding Homo_sapiens 0 2097
ENST00000508946 LPHN3-007 protein_coding Homo_sapiens 0 2097
ENST00000509896 LPHN3-013 protein_coding Homo_sapiens 0 2100
ENST00000511324 LPHN3-014 protein_coding Homo_sapiens 0 2259
ENST00000512091 LPHN3-001 protein_coding Homo_sapiens 0 2100
ENST00000514157 LPHN3-006 protein_coding Homo_sapiens 0 2255
ENST00000514591 LPHN3-003 protein_coding Homo_sapiens 0 3463
ENST00000514996 LPHN3-010 protein_coding Homo_sapiens 0 2255
ENST00000545650 LPHN3-201 protein_coding Homo_sapiens 0 3463

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