C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 22 (organic cation transporter), member 21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124221 Slc22a21-003 ENSMUSG00000063652 10090 - 11:53957974-53979870 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverMuscleOvaryPlacentaTestisENSMUST00000124221
Transcript ID Liver Muscle Ovary Placenta Testis
ENSMUST00000124221 0.084±0.01 0.120±0.00 0.557±0.00 0.901±0.08 4.816±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RF CIL_0007RF_0002 VISTA 11:53756663-54359415
CIL_00093D CIL_00093D_0002 VISTA 11:53760072-54361368
CIL_0000HR CIL_0000HR_0003 CGP 11:53864542-53980332
CIL_0000HR CIL_0000HR_0004 CGP 11:53949965-54028090

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005777 IDA peroxisome
GO:0015226 IDA carnitine transmembrane transporter activity
GO:0015879 IDA carnitine transport
GO:1902603 IDA carnitine transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000200652 SLC22A4-001 protein_coding Homo_sapiens 0 494
ENST00000245407 SLC22A5-001 protein_coding Homo_sapiens 0 544
ENST00000435065 SLC22A5-201 protein_coding Homo_sapiens 0 427
ENST00000437841 SLC22A5-008 nonsense_mediated_decay Homo_sapiens 0 427

Loading