C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | solute carrier family 22 (organic cation/carnitine transporter), member 5 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000437841  |
SLC22A5-008 |
ENSG00000197375 |
9606 | + |
5:132369900-132389005  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00093D | CIL_00093D_0001 | VISTA | 5:131965137-132566411 |
| CIL_0007RF | CIL_0007RF_0001 | VISTA | 5:131967147-132570227 |
| CIL_0000HR | CIL_0000HR_0002 | CGP | 5:132294443-132395614 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000136307
|
Slc22a5-002 | nonsense_mediated_decay | Mus_musculus | 0 | 806 |
|
ENSMUST00000019044
|
Slc22a5-001 | protein_coding | Mus_musculus | 0 | 460 |
|
ENSMUST00000124221
|
Slc22a21-003 | nonsense_mediated_decay | Mus_musculus | 0 | 427 |
|
ENSMUST00000076493
|
Slc22a21-001 | protein_coding | Mus_musculus | 0 | 427 |
|
ENSMUST00000020586
|
Slc22a4-001 | protein_coding | Mus_musculus | 0 | 407 |
|
ENSMUST00000154369
|
Slc22a4-003 | processed_transcript | Mus_musculus | 0 | 366 |
