C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: AT rich interactive domain 5A (MRF1-like)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124280 Arid5a-006 ENSMUSG00000037447 10090 + 1:36307754-36319887 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000124280
Transcript ID Ovary
ENSMUST00000124280 0.347±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070A CIL_00070A_0002 CGP 1:36264597-36324029
CIL_0003NZ CIL_0003NZ_0002 CGP 1:36307733-36369181

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357485 ARID5A-001 protein_coding Homo_sapiens 0 785
ENST00000412735 ARID5A-002 nonsense_mediated_decay Homo_sapiens 0 785
ENST00000454558 ARID5A-004 protein_coding Homo_sapiens 0 785
ENST00000467498 ARID5A-007 retained_intron Homo_sapiens 2e-24 117
ENST00000470579 ARID5A-006 retained_intron Homo_sapiens 9.99995e-41 171
ENST00000497920 ARID5A-005 retained_intron Homo_sapiens 0 791

Loading