C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00070A_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163121-ENSG00000196843 CGP 9606 2:96497643-96552638
GeneTranscriptPositionBiotype
ENSG00000163121 (NEURL3)
neuralized E3 ubiquitin protein ligase 3 		ENST00000310865 (NEURL3-002) 96497646-96505345 protein_coding
ENST00000435380 (NEURL3-004) 96497646-96508109 protein_coding
ENST00000444588 (NEURL3-005) 96499983-96505357 retained_intron
ENST00000451794 (NEURL3-001) 96497643-96505357 protein_coding
ENSG00000196843 (ARID5A)
AT rich interactive domain 5A (MRF1-like) 		ENST00000357485 (ARID5A-001) 96536749-96552638 protein_coding
ENST00000412735 (ARID5A-002) 96536752-96552630 nonsense_mediated_decay
ENST00000454558 (ARID5A-004) 96537345-96552634 protein_coding
ENST00000467498 (ARID5A-007) 96536767-96551165 retained_intron
ENST00000470579 (ARID5A-006) 96536743-96550285 retained_intron
ENST00000497920 (ARID5A-005) 96547390-96552634 retained_intron
ENSG00000235480 (RP11-363D14.1)
 ENST00000425578 (RP11-363D14.1-001) 96527940-96532306 antisense
CIL_00070A_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047180-ENSMUSG00000037447 CGP 10090 1:36264597-36324029
GeneTranscriptPositionBiotype
ENSMUSG00000037447 (Arid5a)
AT rich interactive domain 5A (MRF1-like) 		ENSMUST00000097778 (Arid5a-003) 36307754-36320526 protein_coding
ENSMUST00000115029 (Arid5a-011) 36307769-36322988 protein_coding
ENSMUST00000115031 (Arid5a-004) 36307754-36321071 protein_coding
ENSMUST00000115032 (Arid5a-002) 36307754-36322988 protein_coding
ENSMUST00000116629 (Arid5a-005) 36307754-36320528 nonsense_mediated_decay
ENSMUST00000124280 (Arid5a-006) 36307754-36319887 retained_intron
ENSMUST00000126413 (Arid5a-007) 36307733-36319203 protein_coding
ENSMUST00000137906 (Arid5a-001) 36307754-36324029 protein_coding
ENSMUST00000140218 (Arid5a-012) 36307779-36316578 retained_intron
ENSMUST00000141121 (Arid5a-014) 36317027-36318132 retained_intron
ENSMUST00000142319 (Arid5a-010) 36307754-36317442 protein_coding
ENSMUST00000145179 (Arid5a-008) 36307754-36319214 processed_transcript
ENSMUST00000147123 (Arid5a-013) 36315992-36318136 processed_transcript
ENSMUST00000150747 (Arid5a-009) 36307754-36318288 processed_transcript
ENSMUSG00000047180 (Neurl3)
neuralized homolog 3 homolog (Drosophila) 		ENSMUST00000056946 (Neurl3-001) 36264597-36273435 protein_coding
ENSMUST00000188666 (Neurl3-002) 36269242-36274679 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00070A_0001ENSG00000163121ENST00000310865ENST00000435380ENST00000444588ENST00000451794ENSG00000196843ENST00000357485ENST00000412735ENST00000454558ENST00000467498ENST00000470579ENST00000497920ENSG00000235480ENST00000425578CIL_00070A_0002ENSMUSG00000037447ENSMUST00000097778ENSMUST00000115029ENSMUST00000115031ENSMUST00000115032ENSMUST00000116629ENSMUST00000124280ENSMUST00000126413ENSMUST00000137906ENSMUST00000140218ENSMUST00000141121ENSMUST00000142319ENSMUST00000145179ENSMUST00000147123ENSMUST00000150747ENSMUSG00000047180ENSMUST00000056946ENSMUST00000188666
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00070A_0001ENSG00000163121ENST00000310865ENST00000435380ENST00000444588ENST00000451794ENSG00000196843ENST00000357485ENST00000412735ENST00000454558ENST00000470579ENST00000497920ENSG00000235480ENST00000425578CIL_00070A_0002ENSMUSG00000037447ENSMUST00000097778ENSMUST00000115029ENSMUST00000115031ENSMUST00000115032ENSMUST00000116629ENSMUST00000124280ENSMUST00000126413ENSMUST00000137906ENSMUST00000145179ENSMUSG00000047180ENSMUST00000056946ENSMUST00000188666
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163121 ENST00000310865 N/A 0.043±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.095±0.05 0.100±0.00 N/A
ENST00000435380 N/A N/A N/A N/A 0.372±0.00 N/A 0.014±0.00 N/A N/A N/A N/A N/A 0.127±0.00 N/A
ENST00000444588 N/A N/A 0.206±0.00 N/A N/A 0.106±0.00 N/A N/A N/A N/A N/A 0.327±0.29 N/A N/A
ENST00000451794 0.081±0.00 N/A 0.314±0.00 0.140±0.00 0.298±0.00 0.043±0.00 N/A 4.611±0.00 0.301±0.00 4.714±0.00 N/A 1.696±1.43 0.178±0.00 0.286±0.04
ENSG00000196843 ENST00000357485 12.333±0.00 16.475±0.00 N/A 5.822±0.00 3.553±1.94 15.271±0.00 6.618±0.00 1.935±0.45 N/A 85.633±0.00 19.250±0.00 6.784±2.10 10.811±5.66 6.546±5.00
ENST00000412735 9.323±0.00 22.097±0.00 0.128±0.00 4.534±3.07 3.233±0.88 1.303±0.00 2.970±1.94 4.117±0.00 2.431±1.38 1.917±0.00 2.814±0.33 4.799±1.54 6.619±2.96 2.121±0.94
ENST00000454558 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.605±0.00 0.585±0.00 N/A N/A 0.354±0.00
ENST00000467498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470579 N/A N/A 1.570±0.00 1.442±0.00 9.513±0.00 1.241±0.00 3.542±0.00 N/A 13.471±0.00 7.294±0.00 N/A 16.780±0.00 N/A N/A
ENST00000497920 N/A 8.326±0.00 N/A N/A N/A N/A N/A N/A N/A 32.054±0.00 2.519±0.00 2.172±0.56 N/A N/A
ENSG00000235480 ENST00000425578 N/A N/A N/A 0.726±0.00 N/A N/A 0.518±0.31 N/A N/A 0.394±0.00 N/A 0.068±0.00 0.164±0.00 0.196±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037447 ENSMUST00000097778 N/A N/A N/A N/A N/A 0.786±0.11 0.401±0.00 0.309±0.00 0.252±0.00 N/A 0.184±0.00 1.433±0.31 0.421±0.00 N/A
ENSMUST00000115029 0.601±0.00 N/A N/A N/A 4.646±0.00 N/A 0.258±0.07 0.186±0.00 N/A 0.864±0.00 0.358±0.04 0.941±0.60 0.321±0.00 N/A
ENSMUST00000115031 N/A 0.198±0.00 N/A N/A 2.431±0.00 0.694±0.16 N/A 0.212±0.06 0.242±0.00 N/A N/A 0.976±0.05 0.255±0.00 N/A
ENSMUST00000115032 0.986±0.26 0.296±0.07 0.765±0.07 0.069±0.00 3.710±0.70 0.855±0.28 0.334±0.15 0.305±0.11 0.232±0.12 1.718±0.21 0.415±0.20 1.359±0.45 0.253±0.05 0.334±0.18
ENSMUST00000116629 2.788±0.32 1.570±0.27 1.580±0.13 1.138±0.66 11.888±2.68 2.301±0.21 0.750±0.21 0.883±0.13 0.742±0.26 3.323±0.96 0.872±0.28 3.289±1.39 0.960±0.32 0.432±0.19
ENSMUST00000124280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.347±0.00 N/A N/A
ENSMUST00000126413 N/A N/A N/A 1.779±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.967±0.02 N/A
ENSMUST00000137906 0.360±0.00 0.169±0.00 0.341±0.04 N/A N/A N/A 0.249±0.01 0.141±0.01 0.101±0.00 N/A N/A 0.516±0.17 0.106±0.00 N/A
ENSMUST00000140218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.212±0.00 N/A 1.130±0.00
ENSMUST00000147123 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000047180 ENSMUST00000056946 4.132±0.55 2.405±0.53 3.353±0.60 0.148±0.05 9.645±2.32 46.959±1.81 1.508±0.52 3.387±0.45 1.956±0.48 8.269±1.58 0.452±0.18 3.614±0.86 0.510±0.24 0.104±0.06
ENSMUST00000188666 N/A 3.692±0.92 N/A N/A 12.638±4.85 31.987±4.11 1.204±0.00 N/A 0.901±0.08 5.337±1.13 0.691±0.00 4.107±0.87 0.336±0.00 0.044±0.00

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