C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BRCA1/BRCA2-containing complex, subunit 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124321 Brcc3-005 ENSMUSG00000031201 10090 + X:75433978-75451224 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonLiverOvaryPlacentaTestisENSMUST00000124321
Transcript ID Adipose Bladder Breast Colon Liver Ovary Placenta Testis
ENSMUST00000124321 0.735±0.00 1.224±0.00 0.644±0.24 1.005±0.36 1.316±0.00 1.146±0.37 0.650±0.37 0.047±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LJ CIL_0003LJ_0002 CGP X:75416628-75534942

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330045 BRCC3-002 protein_coding Homo_sapiens 0 869
ENST00000340647 BRCC3-006 protein_coding Homo_sapiens 0 824
ENST00000369459 BRCC3-004 protein_coding Homo_sapiens 0 359
ENST00000369462 BRCC3-001 protein_coding Homo_sapiens 0 363
ENST00000399026 BRCC3-003 protein_coding Homo_sapiens 3e-30 135
ENST00000399042 BRCC3-201 protein_coding Homo_sapiens 0 368
ENST00000411985 BRCC3-007 protein_coding Homo_sapiens 0 363
ENST00000453705 BRCC3-005 nonsense_mediated_decay Homo_sapiens 0 869
ENST00000508559 RP11-844P9.3-001 processed_pseudogene Homo_sapiens 0 337
ENST00000620502 BRCC3-202 protein_coding Homo_sapiens 0 795

Loading