C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: THO complex 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124458 Thoc2-008 ENSMUSG00000037475 10090 - X:41794991-41814246 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonKidneyLiverMuscleOvaryPlacentaENSMUST00000124458
Transcript ID Adrenal Bladder Brain Colon Kidney Liver Muscle Ovary Placenta
ENSMUST00000124458 1.984±1.36 4.490±0.18 7.199±4.59 1.164±0.00 1.029±0.00 3.824±2.35 1.567±0.51 4.130±1.53 3.416±0.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001U7 CIL_0001U7_0002 CGP X:41400854-41920674

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000902 IMP cell morphogenesis
GO:0001824 IMP blastocyst development
GO:0003729 IMP mRNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0010468 IMP regulation of gene expression
GO:0010793 IMP regulation of mRNA export from nucleus
GO:0017145 IMP stem cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000245838 THOC2-201 protein_coding Homo_sapiens 0 767
ENST00000281092 FER-001 protein_coding Homo_sapiens 0 486
ENST00000355725 THOC2-001 protein_coding Homo_sapiens 0 767
ENST00000416618 THOC2-014 protein_coding Homo_sapiens 0 728
ENST00000432353 THOC2-010 nonsense_mediated_decay Homo_sapiens 0 1303
ENST00000436391 FERP1-001 processed_pseudogene Homo_sapiens 0 545
ENST00000438717 FER-201 protein_coding Homo_sapiens 0 486
ENST00000441692 THOC2-009 protein_coding Homo_sapiens 0 1596
ENST00000448128 THOC2-003 protein_coding Homo_sapiens 0 767
ENST00000455053 THOC2-013 protein_coding Homo_sapiens 0 702
ENST00000464604 THOC2-011 retained_intron Homo_sapiens 2e-28 130
ENST00000464992 THOC2-007 retained_intron Homo_sapiens 0 612
ENST00000491737 THOC2-020 protein_coding Homo_sapiens 0 765
ENST00000492203 THOC2-015 processed_transcript Homo_sapiens 0 309
ENST00000496830 THOC2-012 retained_intron Homo_sapiens 0 562
ENST00000497887 THOC2-018 processed_transcript Homo_sapiens 0 763
ENST00000504143 FER-008 nonsense_mediated_decay Homo_sapiens 0 486
ENST00000513777 FER-007 processed_transcript Homo_sapiens 0 289
ENST00000618150 THOC2-202 protein_coding Homo_sapiens 0 1306
ENST00000618353 FER-202 protein_coding Homo_sapiens 0 486

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