C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: rhophilin, Rho GTPase binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124749 Rhpn1-003 ENSMUSG00000022580 10090 + 15:75704308-75714410 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000124749
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000124749 0.098±0.06 0.141±0.07 0.183±0.00 3.849±1.03 0.157±0.11 0.045±0.02 0.044±0.00 2.806±1.12 0.029±0.01 0.288±0.06 0.683±0.19 0.411±0.12 1.517±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008C2 CIL_0008C2_0002 VISTA 15:75534812-76135772
CIL_0001NH CIL_0001NH_0002 CGP 15:75657035-75714410
CIL_0001NI CIL_0001NI_0002 CGP 15:75704280-75747922

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000289013 RHPN1-001 protein_coding Homo_sapiens 0 809
ENST00000522335 RHPN1-002 retained_intron Homo_sapiens 0 787
ENST00000620174 RHPN1-201 protein_coding Homo_sapiens 0 787

Loading