C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, regulatory subunit 42
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124874 Ppp1r42-006 ENSMUSG00000025916 10090 - 1:9968624-10003453 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverMuscleOvaryTestisENSMUST00000124874
Transcript ID Bladder Liver Muscle Ovary Testis
ENSMUST00000124874 0.058±0.00 0.095±0.03 0.031±0.01 0.440±0.00 3.216±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BD CIL_0003BD_0002 CGP 1:9960163-10009136
CIL_0003BC CIL_0003BC_0002 CGP 1:9968624-10038168

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000324682 PPP1R42-001 protein_coding Homo_sapiens 0 856
ENST00000517834 PPP1R42-013 processed_transcript Homo_sapiens 0 191
ENST00000518588 PPP1R42-007 processed_transcript Homo_sapiens 0 499
ENST00000519919 PPP1R42-004 processed_transcript Homo_sapiens 0 377
ENST00000520633 PPP1R42-003 processed_transcript Homo_sapiens 0 292
ENST00000521040 PPP1R42-005 processed_transcript Homo_sapiens 0 436
ENST00000521998 PPP1R42-010 processed_transcript Homo_sapiens 1e-23 113
ENST00000522331 PPP1R42-009 processed_transcript Homo_sapiens 9.80909e-45 183
ENST00000522909 PPP1R42-011 protein_coding Homo_sapiens 0 1035

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