C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: splicing factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125516 Sf1-008 ENSMUSG00000024949 10090 + 19:6373621-6376654 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENSMUST00000125516
Transcript ID Colon
ENSMUST00000125516 43.760±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001YW CIL_0001YW_0002 CGP 19:6363690-6398459

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000227503 SF1-002 protein_coding Homo_sapiens 0 708
ENST00000334944 SF1-001 protein_coding Homo_sapiens 0 708
ENST00000377387 SF1-006 protein_coding Homo_sapiens 0 708
ENST00000377390 SF1-005 protein_coding Homo_sapiens 0 708
ENST00000377394 SF1-004 protein_coding Homo_sapiens 0 689
ENST00000413725 SF1-019 protein_coding Homo_sapiens 9.99967e-42 174
ENST00000433274 SF1-016 protein_coding Homo_sapiens 0 708
ENST00000443908 SF1-014 protein_coding Homo_sapiens 0 520
ENST00000448404 SF1-003 nonsense_mediated_decay Homo_sapiens 0 689
ENST00000477596 SF1-015 retained_intron Homo_sapiens 0 246
ENST00000486867 SF1-020 protein_coding Homo_sapiens 0 675

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