C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 407
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125763 Zfp407-001 ENSMUSG00000048410 10090 - 18:84207704-84589504 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000125763
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000125763 0.485±0.26 0.354±0.06 1.121±0.49 2.113±0.72 0.665±0.45 0.473±0.18 0.527±0.06 0.421±0.11 0.757±0.40 0.787±0.25 0.809±0.07 1.017±0.55 2.739±0.82 0.501±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007J6 CIL_0007J6_0003 UCNEbase 18:83110562-84557428
CIL_000995 CIL_000995_0002 VISTA 18:83942068-84543225
CIL_00088P CIL_00088P_0002 VISTA 18:84072054-84673645
CIL_0008EA CIL_0008EA_0002 VISTA 18:84113592-84715865

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267294 ZIC5-001 protein_coding Homo_sapiens 0.00008 55
ENST00000299687 ZNF407-001 protein_coding Homo_sapiens 0 2645
ENST00000309902 ZNF407-201 protein_coding Homo_sapiens 0 2180
ENST00000577538 ZNF407-006 protein_coding Homo_sapiens 0 2180
ENST00000581829 ZNF407-005 protein_coding Homo_sapiens 0 468
ENST00000582337 ZNF407-002 protein_coding Homo_sapiens 0 2180
ENST00000584235 ZNF407-004 protein_coding Homo_sapiens 0 481

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