C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) inhibitor subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125977 Psmf1-005 ENSMUSG00000032869 10090 - 2:151716062-151720995 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartLiverOvaryPlacentaENSMUST00000125977
Transcript ID Adrenal Breast Colon Heart Liver Ovary Placenta
ENSMUST00000125977 5.628±0.00 2.293±0.00 4.753±0.00 0.670±0.00 4.157±0.00 2.423±0.38 0.968±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ZT CIL_0001ZT_0002 CGP 2:151702008-151744186
CIL_0001ZN CIL_0001ZN_0002 CGP 2:151715812-151874668

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000246015 PSMF1-003 protein_coding Homo_sapiens 0 298
ENST00000333082 PSMF1-201 protein_coding Homo_sapiens 0 590
ENST00000335877 PSMF1-006 protein_coding Homo_sapiens 0 590
ENST00000381898 PSMF1-010 protein_coding Homo_sapiens 0 298
ENST00000435720 PSMF1-004 protein_coding Homo_sapiens 0 274
ENST00000479715 PSMF1-001 processed_transcript Homo_sapiens 9.80909e-45 183
ENST00000484891 PSMF1-005 processed_transcript Homo_sapiens 0 590
ENST00000618417 MKL1-204 protein_coding Homo_sapiens 0.000009 57

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