C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thrombospondin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126315 Thbs3-002 ENSMUSG00000028047 10090 + 3:89215227-89226837 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonLungOvaryTestisENSMUST00000126315
Transcript ID Adipose Bladder Brain Breast Colon Lung Ovary Testis
ENSMUST00000126315 5.315±0.04 7.318±1.39 16.722±2.78 3.502±0.00 5.470±0.00 12.127±0.49 7.351±1.40 4.434±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368378 THBS3-001 protein_coding Homo_sapiens 0 1879
ENST00000428962 THBS3-010 nonsense_mediated_decay Homo_sapiens 0 1029
ENST00000457183 THBS3-009 protein_coding Homo_sapiens 0 1419
ENST00000460050 THBS3-006 processed_transcript Homo_sapiens 0 1072
ENST00000465596 THBS3-005 processed_transcript Homo_sapiens 0 370
ENST00000469769 THBS3-004 retained_intron Homo_sapiens 0 313
ENST00000486260 THBS3-007 processed_transcript Homo_sapiens 0 1827
ENST00000496332 THBS3-008 retained_intron Homo_sapiens 0 316
ENST00000498500 THBS3-003 retained_intron Homo_sapiens 0 475
ENST00000541576 THBS3-201 protein_coding Homo_sapiens 0 1698
ENST00000541990 THBS3-202 protein_coding Homo_sapiens 0 990

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