C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PRP40 pre-mRNA processing factor 40 homolog B (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126955 Prpf40b-015 ENSMUSG00000023007 10090 + 15:99315540-99317010 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000126955
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000126955 17.059±4.81 19.436±5.92 20.033±0.76 24.257±7.75 18.070±1.04 11.055±2.63 8.001±2.34 13.927±0.87 5.237±1.36 19.627±1.47 5.998±0.26 25.399±4.19 5.024±2.75 27.025±6.88

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261897 PRPF40B-002 protein_coding Homo_sapiens 0 824
ENST00000335154 FMNL3-002 protein_coding Homo_sapiens 0 603
ENST00000380281 PRPF40B-001 protein_coding Homo_sapiens 0 824
ENST00000548825 PRPF40B-019 protein_coding Homo_sapiens 0 824

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