| Transcript ID | Brain | Heart | Muscle | Ovary |
|---|---|---|---|---|
| ENST00000548825 | 0.896±0.00 | 2.492±0.00 | 4.193±0.00 | 7.012±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000548825  |
PRPF40B-019 |
ENSG00000110844 |
9606 | + |
12:49623436-49644665  |
protein_coding |
Expression Patterns
|
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IEA | protein binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000118287
|
Prpf40b-006 | protein_coding | Mus_musculus | 0 | 4098 |
|
ENSMUST00000145482
|
Prpf40b-001 | protein_coding | Mus_musculus | 0 | 4065 |
|
ENSMUST00000136980
|
Prpf40b-011 | protein_coding | Mus_musculus | 0 | 3834 |
|
ENSMUST00000150641
|
Prpf40b-003 | retained_intron | Mus_musculus | 0 | 3611 |
|
ENSMUST00000023745
|
Prpf40b-010 | protein_coding | Mus_musculus | 0 | 3585 |
|
ENSMUST00000138036
|
Prpf40b-005 | retained_intron | Mus_musculus | 0 | 2261 |
|
ENSMUST00000130575
|
Prpf40b-002 | retained_intron | Mus_musculus | 0 | 2261 |
|
ENSMUST00000139330
|
Prpf40b-016 | retained_intron | Mus_musculus | 0 | 1170 |
|
ENSMUST00000140806
|
Prpf40b-013 | nonsense_mediated_decay | Mus_musculus | 0 | 1136 |
|
ENSMUST00000134034
|
Prpf40b-007 | protein_coding | Mus_musculus | 0 | 1064 |
|
ENSMUST00000128352
|
Prpf40b-012 | protein_coding | Mus_musculus | 0 | 896 |
|
ENSMUST00000126955
|
Prpf40b-015 | protein_coding | Mus_musculus | 0 | 824 |
|
ENSMUST00000150636
|
Prpf40b-008 | protein_coding | Mus_musculus | 0 | 684 |
|
ENSMUST00000153692
|
Prpf40b-014 | retained_intron | Mus_musculus | 0 | 536 |
|
ENSMUST00000124275
|
Prpf40b-009 | retained_intron | Mus_musculus | 0 | 353 |
