C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tumor necrosis factor, alpha-induced protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127028 Tnfaip2-007 ENSMUSG00000021281 10090 + 12:111450519-111453626 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSMUST00000127028
Transcript ID Brain
ENSMUST00000127028 1.042±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AG CIL_0009AG_0002 VISTA 12:110842738-111443613
CIL_0000OP CIL_0000OP_0002 CGP 12:111417430-111455018

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000333007 TNFAIP2-201 protein_coding Homo_sapiens 0 497
ENST00000559255 TNFAIP2-005 protein_coding Homo_sapiens 0 481
ENST00000559406 TNFAIP2-003 nonsense_mediated_decay Homo_sapiens 0 497
ENST00000560562 TNFAIP2-002 nonsense_mediated_decay Homo_sapiens 0 261
ENST00000560670 TNFAIP2-004 protein_coding Homo_sapiens 0 497
ENST00000560869 TNFAIP2-001 protein_coding Homo_sapiens 0 497
ENST00000561156 TNFAIP2-009 nonsense_mediated_decay Homo_sapiens 0 350

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