C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (DNA directed), gamma 2, accessory subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127061 Polg2-004 ENSMUSG00000020718 10090 - 11:106768253-106779537 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000127061
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000127061 1.186±0.00 2.624±1.12 0.811±0.10 2.869±1.52 3.711±0.00 1.172±0.52 0.780±0.15 1.352±0.34 0.367±0.09 2.465±1.12 0.726±0.05 0.544±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00012N CIL_00012N_0002 CGP 11:106654217-106768794
CIL_0006GT CIL_0006GT_0002 CGP 11:106751226-106779537
CIL_00012I CIL_00012I_0002 CGP 11:106768253-106789185

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003887 IDA DNA-directed DNA polymerase activity
GO:0005739 IDA mitochondrion
GO:0006260 IC DNA replication
GO:0006281 TAS DNA repair
GO:0071897 IDA DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000539111 POLG2-001 protein_coding Homo_sapiens 0 876
ENST00000577506 POLG2-007 processed_transcript Homo_sapiens 0 385
ENST00000578687 POLG2-005 processed_transcript Homo_sapiens 0 300
ENST00000578997 POLG2-003 nonsense_mediated_decay Homo_sapiens 0 329
ENST00000580893 POLG2-004 processed_transcript Homo_sapiens 0 399
ENST00000581355 POLG2-006 protein_coding Homo_sapiens 0 466
ENST00000582501 POLG2-008 processed_transcript Homo_sapiens 0 372
ENST00000585104 POLG2-009 processed_transcript Homo_sapiens 6e-35 150
ENST00000585141 POLG2-002 retained_intron Homo_sapiens 0 536

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