C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal recognition particle 68
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127205 Srp68-003 ENSMUSG00000020780 10090 - 11:116245166-116274217 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastPlacentaTestisENSMUST00000127205
Transcript ID Adrenal Breast Placenta Testis
ENSMUST00000127205 2.407±0.00 2.980±0.00 7.217±0.00 3.818±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0002 VISTA 11:116019003-116619995
CIL_00078N CIL_00078N_0002 CGP 11:116220559-116274217

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307877 SRP68-001 protein_coding Homo_sapiens 0 1251
ENST00000539137 SRP68-002 protein_coding Homo_sapiens 0 826
ENST00000542536 SRP68-004 processed_transcript Homo_sapiens 0 433
ENST00000585539 SRP68-010 processed_transcript Homo_sapiens 0 193
ENST00000588643 SRP68-006 retained_intron Homo_sapiens 0 433
ENST00000591272 SRP68-008 nonsense_mediated_decay Homo_sapiens 0 531
ENST00000592704 SRP68-009 nonsense_mediated_decay Homo_sapiens 0 955
ENST00000602720 SRP68-201 protein_coding Homo_sapiens 0 433

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