C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: autophagy related 16-like 1 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127884 Atg16l1-006 ENSMUSG00000026289 10090 + 1:87778458-87788562 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverPlacentaENSMUST00000127884
Transcript ID Liver Placenta
ENSMUST00000127884 1.543±0.07 1.938±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003HZ CIL_0003HZ_0002 CGP 1:87620312-87792428
CIL_0004L2 CIL_0004L2_0003 CGP 1:87755870-87845158

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000347464 ATG16L1-201 protein_coding Homo_sapiens 0 536
ENST00000373525 ATG16L1-004 protein_coding Homo_sapiens 0 353
ENST00000392017 ATG16L1-001 protein_coding Homo_sapiens 0 536
ENST00000392018 ATG16L1-005 protein_coding Homo_sapiens 0 536
ENST00000392020 ATG16L1-003 protein_coding Homo_sapiens 0 536
ENST00000392021 ATG16L1-002 nonsense_mediated_decay Homo_sapiens 0 536
ENST00000464645 ATG16L1-017 processed_transcript Homo_sapiens 0 538
ENST00000472242 ATG16L1-018 retained_intron Homo_sapiens 0 374
ENST00000473865 ATG16L1-019 retained_intron Homo_sapiens 1.96182e-44 183
ENST00000474148 ATG16L1-008 retained_intron Homo_sapiens 0 575
ENST00000479942 ATG16L1-009 retained_intron Homo_sapiens 0 575
ENST00000492298 ATG16L1-016 retained_intron Homo_sapiens 5e-34 148
ENST00000498620 ATG16L1-015 processed_transcript Homo_sapiens 0 398

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