C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: autophagy related 16-like 1 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392018 ATG16L1-005 ENSG00000085978 9606 + 2:233251714-233295674 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartMuscleENST00000392018
Transcript ID Brain Breast Heart Muscle
ENST00000392018 1.831±0.91 0.781±0.00 1.352±0.09 3.096±1.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003HZ CIL_0003HZ_0001 CGP 2:233059967-233295674
CIL_0004L2 CIL_0004L2_0002 CGP 2:233210051-233347055

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113190 Atg16l1-002 protein_coding Mus_musculus 0 2381
ENSMUST00000151037 Atg16l1-003 retained_intron Mus_musculus 0 1770
ENSMUST00000027512 Atg16l1-001 protein_coding Mus_musculus 0 1267
ENSMUST00000113186 Atg16l1-011 protein_coding Mus_musculus 0 1266
ENSMUST00000137638 Atg16l1-007 retained_intron Mus_musculus 0 942
ENSMUST00000134603 Atg16l1-005 retained_intron Mus_musculus 0 745
ENSMUST00000144047 Atg16l1-008 protein_coding Mus_musculus 0 579
ENSMUST00000127884 Atg16l1-006 retained_intron Mus_musculus 0 536
ENSMUST00000129431 Atg16l1-009 retained_intron Mus_musculus 0 501
ENSMUST00000133072 Atg16l1-004 retained_intron Mus_musculus 0 488

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