C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: structural maintenance of chromosomes 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128118 Smc4-009 ENSMUSG00000034349 10090 + 3:69030373-69033083 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JR CIL_0004JR_0003 CGP 3:68892499-69034623
CIL_0004JQ CIL_0004JQ_0003 CGP 3:69004738-69044755

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000344722 SMC4-007 protein_coding Homo_sapiens 0 656
ENST00000357388 SMC4-001 protein_coding Homo_sapiens 0 656
ENST00000462668 SMC4-008 retained_intron Homo_sapiens 0 656
ENST00000462787 SMC4-006 protein_coding Homo_sapiens 0 224
ENST00000469762 SMC4-003 protein_coding Homo_sapiens 0 656
ENST00000486711 SMC4-025 retained_intron Homo_sapiens 0 442
ENST00000488017 SMC4-024 retained_intron Homo_sapiens 0 222

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