C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | structural maintenance of chromosomes 4 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000128134  |
Smc4-005 |
ENSMUSG00000034349 |
10090 | + |
3:69016490-69018173  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004JR | CIL_0004JR_0003 | CGP | 3:68892499-69034623 |
| CIL_0004JQ | CIL_0004JQ_0003 | CGP | 3:69004738-69044755 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000344722
|
SMC4-007 | protein_coding | Homo_sapiens | 0 | 231 |
|
ENST00000357388
|
SMC4-001 | protein_coding | Homo_sapiens | 0 | 231 |
|
ENST00000462787
|
SMC4-006 | protein_coding | Homo_sapiens | 0 | 231 |
|
ENST00000465563
|
SMC4-019 | retained_intron | Homo_sapiens | 0 | 231 |
|
ENST00000467263
|
SMC4-021 | retained_intron | Homo_sapiens | 0 | 222 |
|
ENST00000468653
|
SMC4-002 | retained_intron | Homo_sapiens | 5e-23 | 113 |
|
ENST00000469762
|
SMC4-003 | protein_coding | Homo_sapiens | 0 | 231 |
|
ENST00000469858
|
SMC4-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 231 |
|
ENST00000487747
|
SMC4-026 | processed_transcript | Homo_sapiens | 0 | 230 |
|
ENST00000489573
|
SMC4-005 | protein_coding | Homo_sapiens | 0 | 231 |
|
ENST00000494612
|
SMC4-020 | processed_transcript | Homo_sapiens | 2e-23 | 113 |
