C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | structural maintenance of chromosomes 4 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000494612  |
SMC4-020 |
ENSG00000113810 |
9606 | + |
3:160412022-160413583  |
processed_transcript |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004JR | CIL_0004JR_0002 | CGP | 3:160256986-160434962 |
| CIL_0004JQ | CIL_0004JQ_0002 | CGP | 3:160399274-160485773 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000148385
|
Smc4-002 | nonsense_mediated_decay | Mus_musculus | 0 | 226 |
|
ENSMUST00000107803
|
Smc4-004 | protein_coding | Mus_musculus | 0 | 226 |
|
ENSMUST00000136502
|
Smc4-003 | protein_coding | Mus_musculus | 0 | 226 |
|
ENSMUST00000042901
|
Smc4-001 | protein_coding | Mus_musculus | 0 | 226 |
|
ENSMUST00000124983
|
Smc4-006 | processed_transcript | Mus_musculus | 6e-28 | 128 |
|
ENSMUST00000128134
|
Smc4-005 | retained_intron | Mus_musculus | 2e-23 | 113 |
|
ENSMUST00000116286
|
Stk40-201 | protein_coding | Mus_musculus | 0.000000005 | 66 |
|
ENSMUST00000127092
|
Stk40-002 | processed_transcript | Mus_musculus | 0.000000005 | 66 |
