C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB8A, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128203 Rab8a-003 ENSMUSG00000003037 10090 + 8:72161359-72176057 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000128203
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000128203 24.222±6.22 37.157±1.64 35.780±8.17 28.089±9.05 18.991±1.22 62.328±9.07 35.457±4.63 29.874±5.34 2.612±0.64 53.638±34.31 104.838±76.39 35.492±30.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000IM CIL_0000IM_0002 CGP 8:72134975-72183904
CIL_0000IL CIL_0000IL_0002 CGP 8:72161200-72200995

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300935 RAB8A-001 protein_coding Homo_sapiens 0 616
ENST00000586682 RAB8A-002 protein_coding Homo_sapiens 0 616
ENST00000587156 RAB8A-007 retained_intron Homo_sapiens 0 619
ENST00000588105 RAB8A-006 processed_transcript Homo_sapiens 0 207
ENST00000589697 RAB8A-003 retained_intron Homo_sapiens 0 464
ENST00000590899 RAB8A-005 retained_intron Homo_sapiens 0 385

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