C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000IL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167461-ENSG00000196684 CGP 9606 19:16111629-16158575
GeneTranscriptPositionBiotype
ENSG00000167461 (RAB8A)
RAB8A, member RAS oncogene family 		ENST00000300935 (RAB8A-001) 16111629-16134234 protein_coding
ENST00000586682 (RAB8A-002) 16111897-16133010 protein_coding
ENST00000587156 (RAB8A-007) 16111897-16127661 retained_intron
ENST00000588105 (RAB8A-006) 16111895-16112757 processed_transcript
ENST00000589697 (RAB8A-003) 16111915-16126990 retained_intron
ENST00000590899 (RAB8A-005) 16111892-16122132 retained_intron
ENST00000592971 (RAB8A-004) 16127951-16132319 retained_intron
CIL_0000IL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000003037-ENSMUSG00000062007 CGP 10090 8:72161200-72200995
GeneTranscriptPositionBiotype
ENSMUSG00000003037 (Rab8a)
RAB8A, member RAS oncogene family 		ENSMUST00000003121 (Rab8a-001) 72161200-72183904 protein_coding
ENSMUST00000128203 (Rab8a-003) 72161359-72176057 retained_intron
ENSMUST00000135613 (Rab8a-002) 72161313-72175863 processed_transcript
ENSMUSG00000062007 (Hsh2d)
hematopoietic SH2 domain containing 		ENSMUST00000072097 (Hsh2d-201) 72189668-72200958 protein_coding
ENSMUST00000165324 (Hsh2d-202) 72193443-72200995 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000IL_0001ENSG00000167461ENST00000300935ENST00000586682ENST00000587156ENST00000588105ENST00000589697ENST00000590899ENST00000592971CIL_0000IL_0002ENSMUSG00000003037ENSMUST00000003121ENSMUST00000128203ENSMUST00000135613ENSMUSG00000062007ENSMUST00000072097ENSMUST00000165324
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000IL_0001ENSG00000167461ENST00000300935ENST00000586682ENST00000587156ENST00000590899ENST00000592971CIL_0000IL_0002ENSMUSG00000003037ENSMUST00000003121ENSMUST00000128203ENSMUSG00000062007ENSMUST00000072097ENSMUST00000165324
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000167461 ENST00000300935 5.694±0.00 N/A 2.023±0.00 2.180±0.90 4.024±0.59 3.730±1.45 0.972±0.14 4.733±0.91 3.660±0.67 6.539±1.77 0.633±0.00 5.896±1.23 6.360±0.42 4.926±0.45
ENST00000586682 13.164±0.00 N/A N/A 1.067±0.00 7.279±0.00 4.159±0.00 1.890±0.00 10.615±0.00 7.465±0.00 N/A 1.615±0.95 16.176±6.57 13.426±4.48 5.537±0.00
ENST00000587156 N/A N/A 5.288±0.00 9.579±1.42 12.750±0.00 14.476±1.47 2.970±0.93 32.557±0.00 11.795±5.55 21.164±0.00 4.606±0.00 53.869±38.75 55.827±0.00 21.223±1.42
ENST00000588105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 40.172±0.00 31.206±0.00
ENST00000592971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 60.272±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000003037 ENSMUST00000003121 12.365±2.06 11.373±4.56 7.992±3.59 9.758±5.77 14.001±5.01 25.598±3.15 4.222±0.55 18.540±1.02 14.629±4.14 13.579±0.95 1.431±0.20 11.907±4.74 10.698±5.71 6.646±2.35
ENSMUST00000128203 24.222±6.22 N/A 37.157±1.64 35.780±8.17 28.089±9.05 N/A 18.991±1.22 62.328±9.07 35.457±4.63 29.874±5.34 2.612±0.64 53.638±34.31 104.838±76.39 35.492±30.22
ENSMUST00000135613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000062007 ENSMUST00000072097 0.380±0.25 N/A 0.073±0.03 N/A 3.686±1.74 2.417±0.43 0.145±0.13 0.399±0.32 0.195±0.22 0.895±0.29 0.152±0.00 0.452±0.27 0.354±0.16 0.084±0.04
ENSMUST00000165324 0.267±0.09 0.096±0.05 0.081±0.00 0.063±0.04 0.950±0.05 N/A 0.094±0.08 0.105±0.00 0.093±0.07 0.163±0.03 N/A 0.218±0.21 0.439±0.30 0.169±0.13

Loading