C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB8A, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000587156 RAB8A-007 ENSG00000167461 9606 + 19:16111897-16127661 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000587156
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000587156 5.288±0.00 9.579±1.42 12.750±0.00 14.476±1.47 2.970±0.93 32.557±0.00 11.795±5.55 21.164±0.00 4.606±0.00 53.869±38.75 55.827±0.00 21.223±1.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000IM CIL_0000IM_0001 CGP 19:16067021-16134234
CIL_0000IL CIL_0000IL_0001 CGP 19:16111629-16158575

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003121 Rab8a-001 protein_coding Mus_musculus 0 627
ENSMUST00000128203 Rab8a-003 retained_intron Mus_musculus 0 619
ENSMUST00000135613 Rab8a-002 processed_transcript Mus_musculus 0 311

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