C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: receptor (calcitonin) activity modifying protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128260 Ramp2-008 ENSMUSG00000001240 10090 + 11:101246391-101259546 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalENSMUST00000128260
Transcript ID Adrenal
ENSMUST00000128260 16.076±5.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004IN CIL_0004IN_0002 CGP 11:101191115-101259546
CIL_0004JZ CIL_0004JZ_0002 CGP 11:101246028-101259549

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007186 IPI G-protein coupled receptor signaling pathway
GO:0015026 IDA coreceptor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253794 VPS25-001 protein_coding Homo_sapiens 0 1323
ENST00000455691 VPS25P1-001 processed_pseudogene Homo_sapiens 0 411
ENST00000589219 VPS25-006 retained_intron Homo_sapiens 0 409
ENST00000589520 VPS25-005 protein_coding Homo_sapiens 0 438
ENST00000589577 VPS25-004 nonsense_mediated_decay Homo_sapiens 0 333
ENST00000590339 VPS25-002 protein_coding Homo_sapiens 0 584
ENST00000591584 VPS25-003 retained_intron Homo_sapiens 0 348

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