C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128955 Rnf7-003 ENSMUSG00000051234 10090 - 9:96473862-96478588 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000128955
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000128955 73.593±17.35 31.158±9.21 42.481±0.00 135.639±0.00 48.644±8.41 49.542±8.16 65.541±10.37 80.038±6.62 24.226±4.94 77.861±11.46 66.087±20.75 144.340±2.61 150.393±35.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I1 CIL_0008I1_0002 VISTA 9:96080125-96682941

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273480 RNF7-001 protein_coding Homo_sapiens 0 329
ENST00000393000 RNF7-002 protein_coding Homo_sapiens 0 283
ENST00000477012 RNF7-003 nonsense_mediated_decay Homo_sapiens 0 263
ENST00000477393 RNF7-004 nonsense_mediated_decay Homo_sapiens 0 248
ENST00000478598 RNF7P1-001 processed_pseudogene Homo_sapiens 0 285
ENST00000480908 RNF7-007 protein_coding Homo_sapiens 0 257
ENST00000498828 RNF7-006 retained_intron Homo_sapiens 0 263

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