C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysine (K)-specific demethylase 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128977 Kdm1b-003 ENSMUSG00000038080 10090 + 13:47066458-47084613 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonMuscleENSMUST00000128977
Transcript ID Bladder Brain Breast Colon Muscle
ENSMUST00000128977 37.897±1.18 0.505±0.00 0.638±0.00 6.449±0.23 0.341±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090E CIL_00090E_0002 VISTA 13:46584783-47186478
CIL_0008X6 CIL_0008X6_0002 VISTA 13:47010584-47612217
CIL_0003RL CIL_0003RL_0002 CGP 13:47012558-47044737
CIL_0003RU CIL_0003RU_0002 CGP 13:47025170-47084613
CIL_0003RV CIL_0003RV_0002 CGP 13:47043499-47106201

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297792 KDM1B-002 protein_coding Homo_sapiens 0 983
ENST00000449850 KDM1B-004 protein_coding Homo_sapiens 0 1053
ENST00000546309 KDM1B-003 protein_coding Homo_sapiens 0 448

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