C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | vacuolar protein sorting 16 (yeast) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000128994  |
Vps16-003 |
ENSMUSG00000027411 |
10090 | + |
2:130424365-130439917  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007SG | CIL_0007SG_0002 | VISTA | 2:130051805-130652389 |
| CIL_00006D | CIL_00006D_0002 | CGP | 2:130406478-130424701 |
| CIL_00012E | CIL_00012E_0002 | CGP | 2:130417247-130444269 |
| CIL_00006B | CIL_00006B_0002 | CGP | 2:130424339-130554026 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003779 | IDA | actin binding |
| GO:0005515 | IPI | protein binding |
| GO:0005769 | IDA | early endosome |
| GO:0005884 | IDA | actin filament |
| GO:0006886 | IEA | intracellular protein transport |
| GO:0046718 | IMP | viral entry into host cell |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000380445
|
VPS16-001 | protein_coding | Homo_sapiens | 0 | 763 |
|
ENST00000380469
|
VPS16-003 | protein_coding | Homo_sapiens | 0 | 763 |
|
ENST00000417508
|
VPS16-004 | protein_coding | Homo_sapiens | 0 | 300 |
|
ENST00000453689
|
VPS16-005 | protein_coding | Homo_sapiens | 0 | 300 |
