C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00006B_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000215305-ENSG00000132670 CGP 9606 20:2840703-3039076
GeneTranscriptPositionBiotype
ENSG00000132635 (PCED1A)
PC-esterase domain containing 1A 		ENST00000356872 (PCED1A-001) 2835314-2841190 protein_coding
ENST00000360652 (PCED1A-003) 2835314-2840692 protein_coding
ENST00000439542 (PCED1A-007) 2838232-2841190 protein_coding
ENST00000448755 (PCED1A-002) 2838232-2840671 protein_coding
ENST00000474714 (PCED1A-004) 2835314-2838366 protein_coding
ENST00000487501 (PCED1A-006) 2835314-2838936 retained_intron
ENSG00000132670 (PTPRA)
protein tyrosine phosphatase, receptor type, A 		ENST00000216877 (PTPRA-001) 2873489-3039076 protein_coding
ENST00000318266 (PTPRA-002) 2873683-3038674 protein_coding
ENST00000356147 (PTPRA-201) 2923207-3038668 protein_coding
ENST00000380393 (PTPRA-003) 2864184-3038674 protein_coding
ENST00000399903 (PTPRA-202) 2873496-3038668 protein_coding
ENST00000430705 (PTPRA-007) 2873683-2986849 protein_coding
ENST00000431048 (PTPRA-008) 2873518-2965202 protein_coding
ENST00000455631 (PTPRA-004) 2873420-3005104 protein_coding
CIL_00006B_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027411-ENSMUSG00000027303 CGP 10090 2:130424339-130554026
GeneTranscriptPositionBiotype
ENSMUSG00000027303 (Ptpra)
protein tyrosine phosphatase, receptor type, A 		ENSMUST00000028769 (Ptpra-001) 130450278-130554026 protein_coding
ENSMUST00000077303 (Ptpra-002) 130450544-130554023 protein_coding
ENSMUSG00000027411 (Vps16)
vacuolar protein sorting 16 (yeast) 		ENSMUST00000028900 (Vps16-001) 130424365-130444269 protein_coding
ENSMUST00000125098 (Vps16-008) 130441608-130443399 retained_intron
ENSMUST00000125973 (Vps16-005) 130424339-130438453 retained_intron
ENSMUST00000128994 (Vps16-003) 130424365-130439917 protein_coding
ENSMUST00000130258 (Vps16-002) 130424404-130440296 processed_transcript
ENSMUST00000131220 (Vps16-007) 130439630-130441705 retained_intron
ENSMUST00000132388 (Vps16-004) 130437636-130439067 retained_intron
ENSMUST00000134677 (Vps16-009) 130443167-130443734 retained_intron
ENSMUST00000137084 (Vps16-006) 130440322-130441307 retained_intron
ENSMUSG00000037773 (Pced1a)
PC-esterase domain containing 1A 		ENSMUST00000089581 (Pced1a-001) 130417683-130424278 protein_coding
ENSMUST00000110277 (Pced1a-002) 130418959-130424687 protein_coding
ENSMUST00000123977 (Pced1a-004) 130418201-130424281 processed_transcript
ENSMUST00000131561 (Pced1a-003) 130417247-130424248 processed_transcript
ENSMUST00000141749 (Pced1a-007) 130418970-130424701 retained_intron
ENSMUST00000142536 (Pced1a-006) 130421890-130424310 retained_intron
ENSMUST00000153663 (Pced1a-005) 130418225-130424266 retained_intron
ENSMUSG00000060029 (4930473A02Rik)
RIKEN cDNA 4930473A02 gene 		ENSMUST00000079964 (4930473A02Rik-201) 130543791-130563749 processed_transcript
ENSMUST00000136793 (4930473A02Rik-001) 130543791-130563749 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00006B_0001ENSG00000132635ENST00000356872ENST00000360652ENST00000439542ENST00000448755ENST00000474714ENST00000487501ENSG00000132670ENST00000216877ENST00000318266ENST00000356147ENST00000380393ENST00000399903ENST00000430705ENST00000431048ENST00000455631CIL_00006B_0002ENSMUSG00000027303ENSMUST00000028769ENSMUST00000077303ENSMUSG00000027411ENSMUST00000028900ENSMUST00000125098ENSMUST00000125973ENSMUST00000128994ENSMUST00000130258ENSMUST00000131220ENSMUST00000132388ENSMUST00000134677ENSMUST00000137084ENSMUSG00000037773ENSMUST00000089581ENSMUST00000110277ENSMUST00000123977ENSMUST00000131561ENSMUST00000141749ENSMUST00000142536ENSMUST00000153663ENSMUSG00000060029ENSMUST00000079964ENSMUST00000136793
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00006B_0001ENSG00000132635ENST00000356872ENST00000360652ENST00000439542ENST00000448755ENST00000474714ENST00000487501ENSG00000132670ENST00000216877ENST00000318266ENST00000356147ENST00000399903ENST00000430705ENST00000431048ENST00000455631CIL_00006B_0002ENSMUSG00000027303ENSMUST00000028769ENSMUSG00000027411ENSMUST00000028900ENSMUST00000125098ENSMUST00000125973ENSMUST00000130258ENSMUST00000132388ENSMUSG00000037773ENSMUST00000089581ENSMUST00000110277ENSMUST00000142536ENSMUST00000153663ENSMUSG00000060029ENSMUST00000079964
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132635 ENST00000356872 1.985±0.00 5.171±0.00 N/A N/A N/A N/A N/A 2.983±0.00 N/A N/A N/A 3.627±0.00 N/A N/A
ENST00000360652 4.690±0.00 6.710±0.00 N/A 4.749±3.18 6.084±0.00 2.950±2.50 1.498±1.43 8.026±0.00 2.351±1.70 4.619±4.26 0.976±0.00 13.380±7.34 6.705±0.40 7.009±1.24
ENST00000439542 N/A N/A N/A N/A 2.222±0.00 N/A 0.291±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000448755 3.811±0.00 7.880±0.00 N/A 5.512±0.00 3.005±2.18 N/A N/A N/A N/A N/A N/A N/A N/A 3.344±0.00
ENST00000474714 N/A N/A N/A N/A N/A N/A 0.165±0.00 N/A N/A N/A 1.256±0.18 13.589±0.00 N/A N/A
ENST00000487501 N/A N/A N/A N/A 1.360±0.00 N/A N/A N/A N/A N/A 0.683±0.00 N/A N/A 5.766±0.00
ENSG00000132670 ENST00000216877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.767±0.00 3.892±0.00 N/A
ENST00000318266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.601±0.00 9.942±6.05 8.981±0.00
ENST00000356147 11.476±0.00 7.848±0.00 N/A 17.327±0.52 6.830±2.29 8.779±0.00 2.931±0.00 3.498±0.00 N/A 6.045±0.59 N/A 19.167±4.80 17.794±6.40 12.146±0.75
ENST00000380393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000399903 9.719±0.00 N/A N/A 32.769±0.00 8.103±0.00 9.657±0.00 2.014±1.67 4.992±0.00 3.846±1.02 7.660±5.08 3.674±0.00 8.542±3.10 6.967±0.00 11.835±0.00
ENST00000430705 N/A N/A N/A 27.559±0.00 N/A N/A 3.558±0.00 N/A N/A 16.371±0.00 N/A N/A N/A N/A
ENST00000431048 N/A N/A N/A N/A N/A N/A N/A N/A 19.841±0.00 N/A 4.331±0.00 N/A 54.273±0.00 N/A
ENST00000455631 N/A N/A N/A N/A N/A 8.949±0.00 2.969±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027303 ENSMUST00000028769 26.364±11.31 66.628±29.88 34.438±2.55 44.216±11.16 29.291±17.70 37.567±9.33 7.131±3.66 17.233±6.65 11.184±2.93 39.561±8.13 3.477±0.45 59.236±25.78 35.134±13.73 4.470±1.63
ENSMUST00000077303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000027411 ENSMUST00000028900 8.989±5.96 11.729±0.00 14.410±3.97 23.518±8.25 12.494±2.36 10.855±3.63 6.361±1.25 7.938±2.57 8.159±3.63 6.182±0.00 2.649±1.02 16.934±5.33 8.560±2.89 6.927±0.86
ENSMUST00000125098 N/A N/A 24.772±0.00 37.332±0.00 N/A N/A N/A N/A 40.498±0.00 N/A 6.788±1.55 54.962±3.32 39.035±15.60 N/A
ENSMUST00000125973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 31.230±5.13 17.418±0.00
ENSMUST00000128994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130258 N/A N/A N/A 34.394±0.00 N/A N/A N/A N/A N/A N/A N/A 38.539±0.00 21.116±0.00 11.430±0.00
ENSMUST00000131220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132388 N/A 23.632±0.00 N/A N/A 30.574±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137084 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037773 ENSMUST00000089581 N/A 3.611±0.00 N/A N/A 8.353±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110277 9.511±1.52 9.351±1.53 N/A N/A 9.970±2.69 7.998±0.37 5.279±0.00 8.332±1.07 7.497±1.76 6.932±0.42 N/A 13.257±2.81 N/A 12.392±0.63
ENSMUST00000123977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131561 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142536 N/A 8.630±2.13 N/A N/A 6.708±0.03 4.302±0.29 4.346±0.12 N/A N/A N/A 2.367±0.80 12.218±2.65 N/A N/A
ENSMUST00000153663 7.519±2.37 6.809±1.20 7.812±2.28 9.459±1.85 7.639±1.34 6.689±0.79 3.911±0.00 5.287±1.17 4.245±0.97 5.716±1.41 1.343±0.27 9.615±2.65 N/A 6.316±2.10
ENSMUSG00000060029 ENSMUST00000079964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.154±0.12
ENSMUST00000136793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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