C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129027 Tcf3-012 ENSMUSG00000020167 10090 - 10:80412627-80415487 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004BR CIL_0004BR_0002 CGP 10:80402997-80433647
CIL_000188 CIL_000188_0002 CGP 10:80409514-80517276

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262965 TCF3-201 protein_coding Homo_sapiens 0 545
ENST00000344749 TCF3-202 protein_coding Homo_sapiens 0 309
ENST00000395423 TCF3-003 protein_coding Homo_sapiens 0 335
ENST00000453954 TCF3-008 protein_coding Homo_sapiens 0 302
ENST00000585855 TCF3-015 nonsense_mediated_decay Homo_sapiens 0 427
ENST00000586164 TCF3-011 nonsense_mediated_decay Homo_sapiens 0 274
ENST00000587425 TCF3-013 protein_coding Homo_sapiens 0 403
ENST00000588136 TCF3-002 protein_coding Homo_sapiens 0 309
ENST00000590436 TCF3-009 protein_coding Homo_sapiens 0.00000000000009 82
ENST00000590605 TCF3-018 retained_intron Homo_sapiens 1e-34 150
ENST00000592395 TCF3-012 nonsense_mediated_decay Homo_sapiens 0 274
ENST00000592628 TCF3-006 protein_coding Homo_sapiens 0 431
ENST00000593064 TCF3-014 protein_coding Homo_sapiens 0 460
ENST00000610756 TCF3-010 retained_intron Homo_sapiens 0 545
ENST00000611869 TCF3-001 protein_coding Homo_sapiens 0 545

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