C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000590436 TCF3-009 ENSG00000071564 9606 - 19:1611168-1619853 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyLiverOvaryPlacentaTestisENST00000590436
Transcript ID Colon Kidney Liver Ovary Placenta Testis
ENST00000590436 10.262±0.00 7.033±0.00 2.551±0.00 32.353±0.00 16.998±0.00 55.496±5.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004BR CIL_0004BR_0001 CGP 19:1597172-1652605
CIL_000188 CIL_000188_0001 CGP 19:1609290-1780988

Gene Ontology

GO IDEvidence TypeGO Description
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000156990 Tcf3-010 protein_coding Mus_musculus 0 612
ENSMUST00000020379 Tcf3-011 protein_coding Mus_musculus 0 612
ENSMUST00000105341 Tcf3-009 protein_coding Mus_musculus 0 612
ENSMUST00000105343 Tcf3-007 protein_coding Mus_musculus 0 612
ENSMUST00000105345 Tcf3-002 protein_coding Mus_musculus 0 612
ENSMUST00000105344 Tcf3-005 protein_coding Mus_musculus 0 612
ENSMUST00000105340 Tcf3-003 protein_coding Mus_musculus 0 592
ENSMUST00000105342 Tcf3-006 protein_coding Mus_musculus 0 193
ENSDART00000078298 tcf3a-202 protein_coding Danio_rerio 1.4013e-45 187
ENSMUST00000127931 Tcf3-013 retained_intron Mus_musculus 4.99997e-41 172
ENSMUST00000105339 Tcf3-008 protein_coding Mus_musculus 4.99997e-41 172
ENSMUST00000020377 Tcf3-004 protein_coding Mus_musculus 4.99997e-41 172
ENSMUST00000105346 Tcf3-001 protein_coding Mus_musculus 4.99997e-41 172
ENSMUST00000129027 Tcf3-012 processed_transcript Mus_musculus 0.00000000000009 82

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