C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000344749 TCF3-202 ENSG00000071564 9606 - 19:1609290-1652329 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungOvaryPlacentaTestisENST00000344749
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000344749 3.938±0.00 4.367±0.00 1.772±0.00 8.510±0.00 4.395±0.00 0.508±0.00 0.783±0.00 5.128±0.00 8.790±8.46 4.077±0.69 19.273±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004BR CIL_0004BR_0001 CGP 19:1597172-1652605
CIL_000188 CIL_000188_0001 CGP 19:1609290-1780988

Gene Ontology

GO IDEvidence TypeGO Description
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020379 Tcf3-011 protein_coding Mus_musculus 0 1378
ENSMUST00000105344 Tcf3-005 protein_coding Mus_musculus 0 1371
ENSMUST00000105340 Tcf3-003 protein_coding Mus_musculus 0 1360
ENSMUST00000105345 Tcf3-002 protein_coding Mus_musculus 0 1360
ENSMUST00000105343 Tcf3-007 protein_coding Mus_musculus 0 1351
ENSMUST00000105341 Tcf3-009 protein_coding Mus_musculus 0 1345
ENSMUST00000156990 Tcf3-010 protein_coding Mus_musculus 0 1338
ENSMUST00000105342 Tcf3-006 protein_coding Mus_musculus 0 1112
ENSMUST00000105346 Tcf3-001 protein_coding Mus_musculus 0 1101
ENSMUST00000020377 Tcf3-004 protein_coding Mus_musculus 0 1094
ENSMUST00000105339 Tcf3-008 protein_coding Mus_musculus 0 1088
ENSMUST00000129027 Tcf3-012 processed_transcript Mus_musculus 0 309
ENSMUST00000127931 Tcf3-013 retained_intron Mus_musculus 0 195
ENSDART00000078298 tcf3a-202 protein_coding Danio_rerio 7.00649e-45 187

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