C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Fanconi anemia, complementation group D2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129462 Fancd2-006 ENSMUSG00000034023 10090 + 6:113568672-113574598 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENSMUST00000129462
Transcript ID Muscle
ENSMUST00000129462 0.179±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002D5 CIL_0002D5_0002 CGP 6:113514874-113597017
CIL_00059I CIL_00059I_0002 CGP 6:113531682-113600715

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000287647 FANCD2-001 protein_coding Homo_sapiens 0 200
ENST00000383807 FANCD2-201 protein_coding Homo_sapiens 0 200
ENST00000419585 FANCD2-002 protein_coding Homo_sapiens 0 200
ENST00000421731 FANCD2-004 nonsense_mediated_decay Homo_sapiens 0 200

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