C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cadherin 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129548 Cdh13-004 ENSMUSG00000031841 10090 + 8:118283796-118757658 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalOvaryENSMUST00000129548
Transcript ID Adrenal Ovary
ENSMUST00000129548 4.847±0.74 5.489±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003NV CIL_0003NV_0002 CGP 8:117791645-119324921
CIL_0008L6 CIL_0008L6_0002 VISTA 8:118077907-118680248
CIL_0005JS CIL_0005JS_0002 CGP 8:118283733-119348927

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000268613 CDH13-009 protein_coding Homo_sapiens 0 483
ENST00000431540 CDH13-003 protein_coding Homo_sapiens 0 580
ENST00000539548 CDH13-006 nonsense_mediated_decay Homo_sapiens 1e-35 156
ENST00000565636 CDH13-004 protein_coding Homo_sapiens 0 580
ENST00000566620 CDH13-201 protein_coding Homo_sapiens 0 483
ENST00000567109 CDH13-001 protein_coding Homo_sapiens 0 586
ENST00000569454 CDH13-015 processed_transcript Homo_sapiens 0 387

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