C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: troponin I, skeletal, fast 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129618 Tnni2-005 ENSMUSG00000031097 10090 + 7:142442908-142444408 retained_intron

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaENSMUST00000129618
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000129618 0.175±0.02 0.069±0.00 0.075±0.00 0.297±0.10 0.157±0.03 0.040±0.00 0.348±0.10 0.171±0.00 0.709±0.57 0.915±0.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MR CIL_0008MR_0002 VISTA 7:142247512-142849546
CIL_0007RG CIL_0007RG_0002 VISTA 7:142251566-142854813
CIL_00097V CIL_00097V_0002 VISTA 7:142268912-142873912
CIL_00048J CIL_00048J_0002 CGP 7:142434850-142444410
CIL_0005ML CIL_0005ML_0003 CGP 7:142441808-142494867

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252898 TNNI2-201 protein_coding Homo_sapiens 0 723
ENST00000381905 TNNI2-003 protein_coding Homo_sapiens 0 723
ENST00000381906 TNNI2-001 protein_coding Homo_sapiens 0 723
ENST00000381911 TNNI2-002 protein_coding Homo_sapiens 0 723
ENST00000617947 TNNI2-202 protein_coding Homo_sapiens 0 732

Loading