C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00048J_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000149043-ENSG00000130598 CGP 9606 11:1828307-1841680
GeneTranscriptPositionBiotype
ENSG00000130598 (TNNI2)
troponin I type 2 (skeletal, fast) 		ENST00000252898 (TNNI2-201) 1839697-1841680 protein_coding
ENST00000381905 (TNNI2-003) 1840194-1841678 protein_coding
ENST00000381906 (TNNI2-001) 1839481-1841678 protein_coding
ENST00000381911 (TNNI2-002) 1838989-1841678 protein_coding
ENST00000468473 (TNNI2-004) 1840218-1840735 retained_intron
ENST00000617947 (TNNI2-202) 1839673-1841677 protein_coding
ENSG00000149043 (SYT8)
synaptotagmin VIII 		ENST00000341958 (SYT8-004) 1834804-1837521 protein_coding
ENST00000381968 (SYT8-002) 1834444-1837521 protein_coding
ENST00000381978 (SYT8-008) 1834590-1837521 protein_coding
ENST00000417052 (SYT8-010) 1828543-1835926 protein_coding
ENST00000424556 (SYT8-015) 1834871-1837521 nonsense_mediated_decay
ENST00000430303 (SYT8-011) 1828307-1835934 protein_coding
ENST00000464897 (SYT8-003) 1834476-1837521 retained_intron
ENST00000475245 (SYT8-013) 1834572-1836104 retained_intron
ENST00000479089 (SYT8-006) 1834310-1837521 retained_intron
ENST00000479276 (SYT8-007) 1831087-1837521 retained_intron
ENST00000482118 (SYT8-005) 1835106-1835582 retained_intron
ENST00000483280 (SYT8-012) 1835560-1836418 processed_transcript
ENST00000490707 (SYT8-009) 1833792-1837521 retained_intron
ENST00000494431 (SYT8-014) 1836029-1836552 retained_intron
CIL_00048J_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031098-ENSMUSG00000031097 CGP 10090 7:142434850-142444410
GeneTranscriptPositionBiotype
ENSMUSG00000031097 (Tnni2)
troponin I, skeletal, fast 2 		ENSMUST00000105971 (Tnni2-001) 142441808-142444410 protein_coding
ENSMUST00000105973 (Tnni2-006) 142443171-142444405 protein_coding
ENSMUST00000129618 (Tnni2-005) 142442908-142444408 retained_intron
ENSMUST00000131034 (Tnni2-004) 142442980-142443859 retained_intron
ENSMUST00000145287 (Tnni2-002) 142441816-142444036 protein_coding
ENSMUST00000149529 (Tnni2-003) 142442330-142444368 protein_coding
ENSMUSG00000031098 (Syt8)
synaptotagmin VIII 		ENSMUST00000097939 (Syt8-002) 142435001-142440328 protein_coding
ENSMUST00000105976 (Syt8-001) 142435001-142440328 protein_coding
ENSMUST00000105977 (Syt8-010) 142438132-142438542 protein_coding
ENSMUST00000118276 (Syt8-003) 142434977-142440396 protein_coding
ENSMUST00000122393 (Syt8-009) 142436834-142440305 protein_coding
ENSMUST00000124963 (Syt8-006) 142439015-142440312 retained_intron
ENSMUST00000128481 (Syt8-008) 142434946-142438968 processed_transcript
ENSMUST00000145964 (Syt8-005) 142438421-142439984 retained_intron
ENSMUST00000148896 (Syt8-004) 142435001-142440328 retained_intron
ENSMUST00000150192 (Syt8-007) 142434850-142439875 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00048J_0001ENSG00000130598ENST00000252898ENST00000381905ENST00000381906ENST00000381911ENST00000468473ENST00000617947ENSG00000149043ENST00000341958ENST00000381968ENST00000381978ENST00000417052ENST00000424556ENST00000430303ENST00000464897ENST00000475245ENST00000479089ENST00000479276ENST00000482118ENST00000483280ENST00000490707ENST00000494431CIL_00048J_0002ENSMUSG00000031097ENSMUST00000105971ENSMUST00000105973ENSMUST00000129618ENSMUST00000131034ENSMUST00000145287ENSMUST00000149529ENSMUSG00000031098ENSMUST00000097939ENSMUST00000105976ENSMUST00000105977ENSMUST00000118276ENSMUST00000122393ENSMUST00000124963ENSMUST00000128481ENSMUST00000145964ENSMUST00000148896ENSMUST00000150192
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00048J_0001ENSG00000130598ENST00000252898ENST00000381905ENST00000381906ENST00000381911ENSG00000149043ENST00000341958ENST00000381968ENST00000381978ENST00000417052ENST00000424556ENST00000464897ENST00000479089ENST00000479276ENST00000482118ENST00000483280ENST00000490707CIL_00048J_0002ENSMUSG00000031097ENSMUST00000105971ENSMUST00000105973ENSMUST00000129618ENSMUST00000131034ENSMUST00000145287ENSMUST00000149529ENSMUSG00000031098ENSMUST00000097939ENSMUST00000105976ENSMUST00000105977ENSMUST00000118276ENSMUST00000122393ENSMUST00000124963ENSMUST00000145964ENSMUST00000148896ENSMUST00000150192
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130598 ENST00000252898 N/A 2.212±0.00 N/A 0.098±0.00 162.578±0.00 0.438±0.07 0.081±0.00 0.177±0.11 0.169±0.00 5.561±0.00 293.580±0.00 0.668±0.00 3.579±1.24 6.242±0.00
ENST00000381905 0.837±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.320±0.00 N/A 0.629±0.00
ENST00000381906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.522±0.00 N/A
ENST00000381911 N/A N/A 0.236±0.00 N/A 35.343±33.32 N/A N/A N/A 2.807±0.00 N/A 1101.441±361.08 0.686±0.19 3.205±1.20 3.168±0.00
ENST00000468473 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000149043 ENST00000341958 N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.069±0.00
ENST00000381968 N/A N/A N/A N/A N/A 0.033±0.00 N/A N/A N/A 2.242±0.00 N/A N/A 1.278±0.00 N/A
ENST00000381978 N/A N/A N/A N/A 1.479±1.43 N/A N/A 0.262±0.00 0.078±0.00 1.631±0.00 N/A 0.458±0.53 8.124±1.12 N/A
ENST00000417052 N/A N/A N/A 0.089±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424556 N/A N/A N/A N/A N/A N/A N/A N/A 0.173±0.00 N/A N/A N/A N/A 0.211±0.00
ENST00000430303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464897 N/A N/A N/A N/A 1.670±0.00 N/A N/A 0.324±0.00 N/A N/A N/A N/A 1.413±0.00 N/A
ENST00000475245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479089 N/A N/A N/A N/A 0.727±0.00 N/A N/A N/A N/A N/A N/A 0.323±0.00 1.274±0.06 N/A
ENST00000479276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 0.704±0.00 N/A
ENST00000482118 0.385±0.00 0.281±0.00 N/A N/A N/A 0.074±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.171±0.00
ENST00000490707 N/A N/A N/A N/A N/A N/A N/A N/A 0.207±0.00 N/A N/A 0.015±0.00 N/A N/A
ENST00000494431 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031097 ENSMUST00000105971 11.819±8.32 N/A N/A 0.343±0.00 505.276±540.02 0.127±0.02 3.202±1.07 29.595±29.46 1.551±1.81 68.206±66.88 9947.709±302.65 3.992±1.81 2.377±0.29 0.185±0.03
ENSMUST00000105973 N/A N/A N/A 0.125±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129618 0.175±0.02 0.069±0.00 N/A 0.075±0.00 0.297±0.10 0.157±0.03 N/A 0.040±0.00 0.348±0.10 0.171±0.00 N/A 0.709±0.57 0.915±0.42 N/A
ENSMUST00000131034 0.050±0.00 0.065±0.00 N/A N/A 0.324±0.06 N/A N/A N/A N/A N/A N/A 0.301±0.00 N/A N/A
ENSMUST00000145287 0.082±0.00 N/A N/A N/A 0.327±0.00 0.150±0.08 N/A N/A N/A N/A N/A 1.476±0.00 2.097±0.03 0.147±0.00
ENSMUST00000149529 N/A N/A N/A 0.168±0.08 0.167±0.00 0.185±0.03 0.431±0.03 N/A 0.451±0.45 0.278±0.00 N/A 0.909±0.55 1.921±1.24 0.074±0.03
ENSMUSG00000031098 ENSMUST00000097939 N/A N/A N/A N/A N/A 0.419±0.00 N/A 0.108±0.00 0.020±0.00 N/A N/A 0.253±0.00 0.336±0.00 N/A
ENSMUST00000105976 0.605±0.00 N/A N/A 0.030±0.00 N/A 0.437±0.03 0.027±0.00 N/A N/A N/A N/A 0.232±0.15 N/A N/A
ENSMUST00000105977 4.927±0.00 N/A N/A N/A 0.753±0.26 3.085±1.60 N/A 0.880±0.37 N/A N/A 0.229±0.00 2.340±1.36 N/A 0.422±0.19
ENSMUST00000118276 0.378±0.00 0.072±0.02 29.453±8.12 0.023±0.00 0.147±0.00 0.229±0.09 N/A 0.144±0.11 0.038±0.00 N/A 0.055±0.02 0.223±0.09 3.791±4.26 0.057±0.00
ENSMUST00000122393 N/A N/A N/A N/A 0.193±0.01 0.208±0.00 0.013±0.00 N/A N/A 0.117±0.00 N/A 0.212±0.06 N/A N/A
ENSMUST00000124963 N/A 0.085±0.04 N/A 0.031±0.01 0.426±0.05 0.650±0.20 N/A 0.061±0.00 0.235±0.18 N/A 0.144±0.00 0.536±0.40 0.839±0.00 0.041±0.00
ENSMUST00000128481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145964 N/A N/A 57.217±17.75 0.026±0.01 0.251±0.10 N/A N/A 0.084±0.03 0.013±0.00 N/A 0.152±0.07 0.299±0.17 5.663±6.34 0.079±0.00
ENSMUST00000148896 N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A 0.115±0.12 0.309±0.21 0.297±0.00 0.307±0.00 5.180±0.00 0.086±0.00
ENSMUST00000150192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.02 0.141±0.00 7.012±0.00 N/A

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