C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005ML_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000029069-ENSDARG00000027310 CGP 7955 25:32120686-32237786
GeneTranscriptPositionBiotype
ENSDARG00000027310 (LSP1)
lymphocyte-specific protein 1 		ENSDART00000067030 (LSP1-002) 32167249-32237786 protein_coding
ENSDART00000156916 (LSP1-001) 32167241-32187385 retained_intron
ENSDARG00000029069 (tnni2a.4)
troponin I, skeletal, fast 2a, tandem duplicate 4 		ENSDART00000036275 (tnni2a.4-001) 32120686-32131929 protein_coding
ENSDARG00000097224 (PRR33)
proline rich 33 		ENSDART00000156828 (PRR33-001) 32232170-32239750 protein_coding
CIL_0005ML_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130598-ENSG00000130592 CGP 9606 11:1838989-1892267
GeneTranscriptPositionBiotype
ENSG00000130592 (LSP1)
lymphocyte-specific protein 1 		ENST00000311604 (LSP1-004) 1852970-1892263 protein_coding
ENST00000381775 (LSP1-001) 1865165-1892263 protein_coding
ENST00000405957 (LSP1-005) 1868673-1892263 protein_coding
ENST00000406638 (LSP1-002) 1870244-1892263 protein_coding
ENST00000417766 (LSP1-008) 1870886-1886866 protein_coding
ENST00000418975 (LSP1-016) 1870244-1881552 protein_coding
ENST00000421485 (LSP1-013) 1863246-1883428 protein_coding
ENST00000429923 (LSP1-015) 1870150-1884009 protein_coding
ENST00000432093 (LSP1-010) 1876477-1886866 protein_coding
ENST00000446808 (LSP1-014) 1864172-1883997 protein_coding
ENST00000451814 (LSP1-006) 1869144-1883442 protein_coding
ENST00000457279 (LSP1-007) 1869642-1886866 protein_coding
ENST00000464670 (LSP1-012) 1886732-1887345 retained_intron
ENST00000472974 (LSP1-009) 1871352-1887576 processed_transcript
ENST00000484895 (LSP1-011) 1884388-1887502 retained_intron
ENST00000485341 (LSP1-003) 1880677-1892267 processed_transcript
ENST00000612798 (LSP1-201) 1870252-1892263 protein_coding
ENSG00000130598 (TNNI2)
troponin I type 2 (skeletal, fast) 		ENST00000252898 (TNNI2-201) 1839697-1841680 protein_coding
ENST00000381905 (TNNI2-003) 1840194-1841678 protein_coding
ENST00000381906 (TNNI2-001) 1839481-1841678 protein_coding
ENST00000381911 (TNNI2-002) 1838989-1841678 protein_coding
ENST00000468473 (TNNI2-004) 1840218-1840735 retained_intron
ENST00000617947 (TNNI2-202) 1839673-1841677 protein_coding
ENSG00000184682 (PRR33)
proline rich 33 		ENST00000391480 (PRR33-001) 1889145-1890854 protein_coding
CIL_0005ML_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031097-ENSMUSG00000018819 CGP 10090 7:142441808-142494867
GeneTranscriptPositionBiotype
ENSMUSG00000018819 (Lsp1)
lymphocyte specific 1 		ENSMUST00000018963 (Lsp1-001) 142460846-142494867 protein_coding
ENSMUST00000038946 (Lsp1-005) 142471843-142494599 protein_coding
ENSMUST00000105966 (Lsp1-004) 142472151-142494600 protein_coding
ENSMUST00000105967 (Lsp1-002) 142460864-142494603 protein_coding
ENSMUST00000105968 (Lsp1-012) 142460809-142494867 protein_coding
ENSMUST00000126149 (Lsp1-010) 142489017-142490422 retained_intron
ENSMUST00000128986 (Lsp1-006) 142471872-142488371 retained_intron
ENSMUST00000132956 (Lsp1-007) 142474994-142486504 processed_transcript
ENSMUST00000140626 (Lsp1-008) 142483259-142489983 processed_transcript
ENSMUST00000142408 (Lsp1-011) 142489813-142494517 retained_intron
ENSMUST00000149521 (Lsp1-003) 142477013-142494867 processed_transcript
ENSMUST00000156960 (Lsp1-009) 142483404-142486480 processed_transcript
ENSMUSG00000031097 (Tnni2)
troponin I, skeletal, fast 2 		ENSMUST00000105971 (Tnni2-001) 142441808-142444410 protein_coding
ENSMUST00000105973 (Tnni2-006) 142443171-142444405 protein_coding
ENSMUST00000129618 (Tnni2-005) 142442908-142444408 retained_intron
ENSMUST00000131034 (Tnni2-004) 142442980-142443859 retained_intron
ENSMUST00000145287 (Tnni2-002) 142441816-142444036 protein_coding
ENSMUST00000149529 (Tnni2-003) 142442330-142444368 protein_coding
ENSMUSG00000043795 (Prr33)
proline rich 33 		ENSMUST00000054910 (Prr33-001) 142491074-142506771 protein_coding
ENSMUST00000151580 (Prr33-002) 142492750-142496971 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005ML_0001ENSDARG00000027310ENSDART00000067030ENSDART00000156916ENSDARG00000029069ENSDART00000036275ENSDARG00000097224ENSDART00000156828CIL_0005ML_0002ENSG00000130592ENST00000311604ENST00000381775ENST00000405957ENST00000406638ENST00000417766ENST00000418975ENST00000421485ENST00000429923ENST00000432093ENST00000446808ENST00000451814ENST00000457279ENST00000464670ENST00000472974ENST00000484895ENST00000485341ENST00000612798ENSG00000130598ENST00000252898ENST00000381905ENST00000381906ENST00000381911ENST00000468473ENST00000617947ENSG00000184682ENST00000391480CIL_0005ML_0003ENSMUSG00000018819ENSMUST00000018963ENSMUST00000038946ENSMUST00000105966ENSMUST00000105967ENSMUST00000105968ENSMUST00000126149ENSMUST00000128986ENSMUST00000132956ENSMUST00000140626ENSMUST00000142408ENSMUST00000149521ENSMUST00000156960ENSMUSG00000031097ENSMUST00000105971ENSMUST00000105973ENSMUST00000129618ENSMUST00000131034ENSMUST00000145287ENSMUST00000149529ENSMUSG00000043795ENSMUST00000054910ENSMUST00000151580
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005ML_0001ENSDARG00000027310ENSDART00000067030ENSDARG00000029069ENSDART00000036275ENSDARG00000097224ENSDART00000156828CIL_0005ML_0002ENSG00000130592ENST00000311604ENST00000381775ENST00000405957ENST00000406638ENST00000417766ENST00000429923ENST00000432093ENST00000446808ENST00000451814ENST00000472974ENST00000485341ENSG00000130598ENST00000252898ENST00000381905ENST00000381906ENST00000381911ENSG00000184682ENST00000391480CIL_0005ML_0003ENSMUSG00000018819ENSMUST00000018963ENSMUST00000038946ENSMUST00000105966ENSMUST00000105967ENSMUST00000105968ENSMUST00000126149ENSMUST00000132956ENSMUST00000140626ENSMUST00000142408ENSMUST00000149521ENSMUSG00000031097ENSMUST00000105971ENSMUST00000105973ENSMUST00000129618ENSMUST00000131034ENSMUST00000145287ENSMUST00000149529ENSMUSG00000043795ENSMUST00000054910
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000027310 ENSDART00000067030 N/A N/A N/A 0.542±0.19 N/A N/A 4.848±2.45 2.748±0.48 5.137±0.00 N/A 0.888±0.00 N/A N/A N/A
ENSDART00000156916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000029069 ENSDART00000036275 N/A N/A N/A 0.256±0.00 N/A N/A N/A 0.754±0.00 0.052±0.00 N/A 90.212±0.00 N/A N/A N/A
ENSDARG00000097224 ENSDART00000156828 N/A N/A N/A 0.223±0.06 N/A N/A 1.859±0.33 3.322±0.00 0.147±0.00 N/A 52.669±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130592 ENST00000311604 14.005±0.00 33.802±0.00 0.502±0.00 1.312±1.10 7.791±4.91 2.456±0.00 1.523±0.00 1.462±0.44 1.302±0.85 10.377±3.04 N/A 3.735±2.94 21.591±0.37 N/A
ENST00000381775 N/A N/A N/A N/A N/A N/A N/A 0.577±0.00 N/A N/A N/A N/A N/A N/A
ENST00000405957 N/A N/A N/A N/A 6.537±0.00 3.611±0.00 2.121±0.00 N/A 1.532±0.00 N/A 1.451±0.00 2.300±0.00 12.727±4.45 3.847±2.21
ENST00000406638 N/A N/A N/A N/A N/A 0.506±0.00 N/A N/A N/A N/A 0.614±0.00 N/A N/A 0.879±0.00
ENST00000417766 N/A N/A N/A 1.586±0.00 N/A N/A 0.461±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000418975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429923 N/A N/A N/A 0.340±0.00 3.727±0.00 4.087±0.00 0.717±0.00 2.636±0.00 N/A N/A 4.244±0.00 N/A 10.621±0.00 N/A
ENST00000432093 N/A N/A N/A N/A N/A N/A N/A N/A 3.653±0.00 N/A N/A 0.863±0.00 N/A N/A
ENST00000446808 N/A N/A N/A N/A N/A N/A N/A N/A 4.875±0.00 N/A N/A N/A N/A N/A
ENST00000451814 N/A N/A N/A N/A N/A N/A N/A N/A 1.350±0.00 N/A N/A N/A N/A N/A
ENST00000457279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464670 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472974 N/A N/A N/A N/A 2.202±0.00 N/A N/A 1.213±0.00 N/A N/A 3.249±0.00 4.260±0.00 5.079±0.00 2.792±0.00
ENST00000484895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485341 N/A N/A N/A N/A N/A 0.725±0.00 0.436±0.00 N/A N/A N/A N/A 0.919±0.00 N/A N/A
ENST00000612798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000130598 ENST00000252898 N/A 2.212±0.00 N/A 0.098±0.00 162.578±0.00 0.438±0.07 0.081±0.00 0.177±0.11 0.169±0.00 5.561±0.00 293.580±0.00 0.668±0.00 3.579±1.24 6.242±0.00
ENST00000381905 0.837±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.320±0.00 N/A 0.629±0.00
ENST00000381906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.522±0.00 N/A
ENST00000381911 N/A N/A 0.236±0.00 N/A 35.343±33.32 N/A N/A N/A 2.807±0.00 N/A 1101.441±361.08 0.686±0.19 3.205±1.20 3.168±0.00
ENST00000468473 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000184682 ENST00000391480 0.380±0.00 2.489±0.00 N/A N/A N/A N/A 0.136±0.00 N/A 0.019±0.00 N/A N/A N/A 0.443±0.09 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018819 ENSMUST00000018963 26.887±14.99 2.549±0.29 N/A N/A 28.406±4.43 11.410±0.35 N/A 2.391±1.00 4.261±2.60 17.880±4.05 5.422±1.66 18.256±0.15 N/A 0.271±0.11
ENSMUST00000038946 55.788±39.56 N/A 89.441±12.43 0.789±0.05 N/A 10.365±1.05 N/A N/A 2.178±0.00 N/A N/A 13.650±5.97 3.026±0.00 0.528±0.00
ENSMUST00000105966 65.833±46.01 N/A 41.147±0.00 0.587±0.00 N/A 9.450±0.00 N/A N/A N/A N/A 3.387±0.42 14.812±6.13 2.486±0.37 0.432±0.03
ENSMUST00000105967 N/A 4.274±0.79 N/A 0.771±0.20 44.615±7.84 11.602±1.84 15.315±0.79 5.865±2.79 4.516±3.79 25.897±1.78 4.772±2.69 17.332±4.71 6.464±3.85 0.665±0.42
ENSMUST00000105968 N/A N/A N/A 0.206±0.00 N/A N/A N/A 2.083±1.01 0.899±0.56 N/A 2.131±0.00 N/A 12.003±0.00 N/A
ENSMUST00000126149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.692±0.00 N/A
ENSMUST00000128986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132956 N/A 3.811±0.00 N/A N/A N/A 13.758±0.00 N/A N/A N/A N/A N/A N/A N/A 0.937±0.32
ENSMUST00000140626 N/A N/A N/A 1.777±0.00 N/A N/A N/A N/A 0.530±0.00 N/A N/A 34.606±0.00 9.162±0.00 1.211±0.00
ENSMUST00000142408 107.435±64.23 4.765±0.92 N/A N/A 72.681±14.85 29.859±3.74 N/A 5.156±0.42 1.896±1.91 28.447±3.20 12.157±1.41 54.716±22.10 39.898±39.96 2.472±0.00
ENSMUST00000149521 N/A N/A N/A 1.015±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031097 ENSMUST00000105971 11.819±8.32 N/A N/A 0.343±0.00 505.276±540.02 0.127±0.02 3.202±1.07 29.595±29.46 1.551±1.81 68.206±66.88 9947.709±302.65 3.992±1.81 2.377±0.29 0.185±0.03
ENSMUST00000105973 N/A N/A N/A 0.125±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129618 0.175±0.02 0.069±0.00 N/A 0.075±0.00 0.297±0.10 0.157±0.03 N/A 0.040±0.00 0.348±0.10 0.171±0.00 N/A 0.709±0.57 0.915±0.42 N/A
ENSMUST00000131034 0.050±0.00 0.065±0.00 N/A N/A 0.324±0.06 N/A N/A N/A N/A N/A N/A 0.301±0.00 N/A N/A
ENSMUST00000145287 0.082±0.00 N/A N/A N/A 0.327±0.00 0.150±0.08 N/A N/A N/A N/A N/A 1.476±0.00 2.097±0.03 0.147±0.00
ENSMUST00000149529 N/A N/A N/A 0.168±0.08 0.167±0.00 0.185±0.03 0.431±0.03 N/A 0.451±0.45 0.278±0.00 N/A 0.909±0.55 1.921±1.24 0.074±0.03
ENSMUSG00000043795 ENSMUST00000054910 N/A 1.264±0.25 N/A 0.103±0.00 50.724±1.96 N/A 9.983±0.27 N/A 0.206±0.15 N/A 71.500±2.05 7.718±5.04 0.893±0.42 0.182±0.12
ENSMUST00000151580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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