C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: multiple PDZ domain protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000447879 MPDZ-009 ENSG00000107186 9606 - 9:13106860-13250358 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartLiverLungMuscleOvaryTestisENST00000447879
Transcript ID Bladder Brain Breast Heart Liver Lung Muscle Ovary Testis
ENST00000447879 2.243±0.00 1.860±0.00 4.312±0.00 1.584±0.00 4.326±0.00 2.039±0.89 1.336±0.14 1.351±0.00 1.632±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000145 CIL_000145_0001 CGP 9:12775021-13279590
CIL_0009AW CIL_0009AW_0001 VISTA 9:13014076-13615964
CIL_000746 CIL_000746_0001 CGP 9:13105704-14398983

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0008022 IPI protein C-terminus binding
GO:0016032 IEA viral process
GO:0016327 IDA apicolateral plasma membrane
GO:0043005 IEA neuron projection
GO:0045211 IEA postsynaptic membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102830 Mpdz-001 protein_coding Mus_musculus 0 3262
ENSMUST00000107262 Mpdz-201 protein_coding Mus_musculus 0 3249
ENSMUST00000107258 Mpdz-010 protein_coding Mus_musculus 0 3223
ENSMUST00000134726 Mpdz-011 protein_coding Mus_musculus 0 1399
ENSMUST00000131418 Mpdz-006 retained_intron Mus_musculus 0 634
ENSMUST00000131547 Mpdz-014 protein_coding Mus_musculus 0 628
ENSMUST00000131197 Mpdz-013 protein_coding Mus_musculus 0 512
ENSMUST00000129732 Mpdz-004 retained_intron Mus_musculus 0 483
ENSMUST00000125288 Mpdz-009 protein_coding Mus_musculus 0 433
ENSMUST00000134572 Mpdz-012 protein_coding Mus_musculus 0 315
ENSMUST00000156441 Mpdz-007 retained_intron Mus_musculus 0 265

Loading